Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy14g0275 | ATGCGAGCTTCATGGGCTGATTTGGCTGCAAATTCTGCAGCTGAGGTTGCTGGTTCTGGTACTTCAGCCAACAATGCCGGGGCTAGTAACAGTTTACCTCCATCCCGGTCTACTTACGTGCCTCCGCATCTGAGGAACCGGCCGCCATCAGCTGAACCATCTGCCCCGCCATATAGTGGCGGTGCAACTTCTGGTTCTGGGGCTGATGCAGTTAATTCTGGATCACGTTGGGGTGCACCTCGTGGCGATTACCGTTCAGGGGGGAACAAAAGTGGATGGGGGAGCAGAAGTGGGGGTTGGGATCGTGGGAGGGACCGTGAGGTCAATCCGTTTGGAGATCAGGATGACACAGAGGAGGCATTTGGTGAGCAAGAGAACACGGGGATAAATTTTGATGCCTACGAGGACATTCCGGTGGAGACTAGCGGGGATAATGTGCCACCACCTGTGAATACATTTGCTGAGATTGACTTGGGTGAAGCACTTAATCGTAATATAATGAGGTGCAAATATGTTAAGCCGACGCCTGTTCAGCGGCATGCCATACCAATTTCCCTTGCTGGAAGGGATTTGATGGCCTGTGCTCAGACTGGTTCTGGAAAGACAGCTGCTTTCTGTTTCCCAATTATCAGTGGAATTCTGAGGGGCCAACCTATGCAAAGGCCACCTCGTGGTGTGCGTACTGTGTATCCACTTGCCCTTGTTCTCTCACCAACTAGGGAGCTATCAATGCAAATACATGACGAGGCTAGGAAGTTTGCATATCAAACAGGCGTTAAGGTGGTGGTTGCTTATGGTGGAGCTCCAATAAACCATCAGCTAAGAGAGCTTGAGAAGGGGGTGGACATTCTTGTTGCAACTCCTGGAAGACTGGTAGATTTGCTGGAGAGAGCTAGAGTTTCACTTCAGATGATAAGATATCTAGCCCTAGATGAGGCAGATAGGATGCTGGATATGGGTTTTGAGCCGCAAATAAGGAAGATTGTCGAACAAATGGATATGCCTCCTCCAGGTGTAAGACAGACTATGCTATTCAGTGCCACGTTTCCTAAAGAGATACAGAGACTAGCCTCGGATTTCCTGTCAAAATACATTTTTCTTGCTGTTGGAAGAGTTGGGTCAAGTACCGATTTAATTGTCCAAAGAGTTGAGTATGTTCAGGAGTCTGACAAGAGAAGTCATCTCATGGATCTTCTTCATGCACAAAGAGCAAATGGCGTGCAAGGAAAGCAAGCTTTGACATTAGTTTTTGTGGAGACAAAGAAGGGAGCTGATGCACTGGAACATTGGCTGTGTATGAATGGTTTTCCAGCTACTACCATTCATGGAGACCGGACTCAACAGGAAAGAGAAATGGCATTAAGGTCATTTAAGAGTGGCAACACGCCCATATTGGTTGCCACTGATGTGGCTGCACGCGGTCTTGATATTCCTCATGTCGCCCATGTTGTTAACTTTGACCTTCCCAATGATATTGATGACTATGTACACCGTATCGGAAGGACGGGACGTGCTGGAAAGAAAGGCCTTGCAACTGCATTCTTTAATGACAACAATGCCTCCCTTGCAAGGTCTTTAGCAGAACTAATGCAGGAAGCAAATCAAGAAGTGCCAGCATGGCTCTCACGGTATGCTGCTCGATCTTCATTTGGAGGTAGGAACCGTCGTTCGGGAGGAGGGCGTTTTGGTGGCCGAGACTTTCGAAGAGAAGGTTCTTTCAATAGGGGTGGTTCTGATTACTACAATGCCGGAAACAGCAGTGGTGGATATGGTGCGTCTGGTGGATATGGTCCCGGTGGAACCAGTGCATGGGATTAA | 1818 | 0.484 | MRASWADLAANSAAEVAGSGTSANNAGASNSLPPSRSTYVPPHLRNRPPSAEPSAPPYSGGATSGSGADAVNSGSRWGAPRGDYRSGGNKSGWGSRSGGWDRGRDREVNPFGDQDDTEEAFGEQENTGINFDAYEDIPVETSGDNVPPPVNTFAEIDLGEALNRNIMRCKYVKPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGILRGQPMQRPPRGVRTVYPLALVLSPTRELSMQIHDEARKFAYQTGVKVVVAYGGAPINHQLRELEKGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGVRQTMLFSATFPKEIQRLASDFLSKYIFLAVGRVGSSTDLIVQRVEYVQESDKRSHLMDLLHAQRANGVQGKQALTLVFVETKKGADALEHWLCMNGFPATTIHGDRTQQEREMALRSFKSGNTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKKGLATAFFNDNNASLARSLAELMQEANQEVPAWLSRYAARSSFGGRNRRSGGGRFGGRDFRREGSFNRGGSDYYNAGNSSGGYGASGGYGPGGTSAWD* | 606 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy14g0275 | 605 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 378 | 545 | IPR001650 | - | |
Ahy14g0275 | 605 | PANTHER | DEAD-BOX ATP-DEPENDENT RNA HELICASE 52B-RELATED | 55 | 577 | - | - | |
Ahy14g0275 | 605 | SMART | helicmild6 | 425 | 506 | IPR001650 | - | |
Ahy14g0275 | 605 | MobiDBLite | consensus disorder prediction | 1 | 126 | - | - | |
Ahy14g0275 | 605 | Pfam | Helicase conserved C-terminal domain | 391 | 506 | IPR001650 | - | |
Ahy14g0275 | 605 | Gene3D | - | 370 | 549 | IPR027417 | - | |
Ahy14g0275 | 605 | Gene3D | - | 107 | 369 | IPR027417 | - | |
Ahy14g0275 | 605 | MobiDBLite | consensus disorder prediction | 57 | 71 | - | - | |
Ahy14g0275 | 605 | MobiDBLite | consensus disorder prediction | 584 | 605 | - | - | |
Ahy14g0275 | 605 | CDD | SF2_C_DEAD | 379 | 515 | - | - | |
Ahy14g0275 | 605 | Pfam | DEAD/DEAH box helicase | 175 | 356 | IPR011545 | GO:0003676|GO:0005524 | |
Ahy14g0275 | 605 | PANTHER | ATP-DEPENDENT RNA HELICASE DBP3 | 55 | 577 | - | - | |
Ahy14g0275 | 605 | MobiDBLite | consensus disorder prediction | 99 | 113 | - | - | |
Ahy14g0275 | 605 | ProSiteProfiles | DEAD-box RNA helicase Q motif profile. | 151 | 179 | IPR014014 | GO:0003724 | |
Ahy14g0275 | 605 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 182 | 367 | IPR014001 | - | |
Ahy14g0275 | 605 | CDD | DEADc_DDX3_DDX4 | 152 | 373 | IPR044763 | GO:0003724|GO:0005524 | |
Ahy14g0275 | 605 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 232 | 522 | IPR027417 | - | |
Ahy14g0275 | 605 | SMART | ultradead3 | 170 | 382 | IPR014001 | - | |
Ahy14g0275 | 605 | MobiDBLite | consensus disorder prediction | 15 | 37 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy14g0275 | Ahy-Chr14 | 4011333 | 4016506 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy14g0275 | 149 | 538 | Eukaryotic Initiation Factors Gene Family | AT3G19760 | 32.225 | 5.37e-64 | 214 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy14g0275 | K11594 | - | gmx:100795756 | 952.199 |