Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy14g0264 | ATGGGGATAAAGAAGAGCGAAAAAGGCAGCAAGAAAGTGATGGAAAATAAGAAGAATGAGAAGAAAGATGTTGGCAGTGCTGCCAGCAATGCAACCATAGGAAATGACAGCGTTTTTGCTTCTTGCTCCTTCTCTAGCCTTGGTCTTCACCCTTCCTTGTGCGATGAACTGCGTGAAAAATTGGGATTCGAGGTTCCAACTCTGGTGCAAGCTCAAGCCATTCCTGTTATTCTCGCTGGCCGTCATGCACTTATTAATGCTGCCACAGGCACAGGGAAGACAGTTGCCTACTTAGCTCCACTTATTCATCACTTGCAGAATTATGATACTCGCACACAACGCTCTGATGGAACATTTGCGTTGGTTCTTGTACCGACGCGTGAGCTTTGTCTGCAGGTTTATGAAATTCTTCAAAAGCTATTGCATCGATTCCATTGGATTGTTCCCGGGTATGTTATGGGTGGTGAAAATAGATCAAAGGAGAAAGCTAGGCTACGCAAAGGCATATCAATTCTTATAGCAACACCTGGGCGCCTTTTAGATCATTTGAAGAATACATCATCATTCTTGTACACAAAATTGCGCTGGATAATTTTTGATGAAGCTGATAGGATTTTGGAATTAGGATTTGGACAAGATATACAGGAAATACTACATCTTTTGGGTTCAAGGAAAGCAGCAAATGATAACAAGGAGAGTACAGTTCCAAGAAACTCTGAATTTCAAAGGCAGAATTTGCTTTTTTCTGCCACCTTAAATGAGAAAGTGAACCATCTTGCTAAAATAAGTTTACACAATCCAGTGATGATTGGTCTTGAGGGTAAAACAAGAAAACCAGTATCAACAATTGAAAGCATTGATCCTTCAGAGTCTGATGAAGAAGACGAAGTCAAGTATTCCAGTAAAATAGCAACAGCTGTAGATTATAAAATCCCCACACAGTTAATTCAGAGATACGTGAAAGTGCCTTGTGGTTCTCGGCTTGCTGTTCTTCTTTCAATTCTAAAGCATCTTTTTGAAAGAGACACTTCACAAAAGGTTGTGGTATTTTTTTCGACATGTGATGCGGTAGACTTTCACTATTCGCTACTAAGTGAGTTCCATTTCTCGACTGATCCTCAAACAAAAGAAAGGGTCATACAGATGTTTCTTGGATGCCAAACTTTTCGATTGCATGGTAATATGGAACATGAAGACCGGAGATCTACTTTTCAGGCTTTTAAAACTGAGAAATCTGCTTTGCTTTTGTCCACTGATGTTTCTGCTAGAGGCTTGGATTTTCCTAAGGTTCGATGCATCATACAGTATGATTCTCCTGGGGAAGCTACTGAATATGTGCACAGAGTTGGTAGAACTGCTCGTCTGGGTGAAAGGGGAGAGTCCTTGTTATTTCTGCAACCAGTTGAAATAGATTATTTACAGGACTTGGAGAAACATGGTGTTTCACTAGCAGAGTATCCTCTTCTCAAAGTGTTGGATAATTTTACATTACACGGACAGAACAAACAAGTAAAGAAGTCTGTTTTCATCGACTTGCATCCTTGGGTCCTTTGTCTCCAGAAGGCACTTGAATCATTCATCATTTCCAAGCCCAAGATGGATGAACTTGCTAGGAAGGGATTTTGCTCTTGGGTCCGTGCTTACACAGCACATCGTGGTGAGCTGAAAACAATATTTATGATCAAGAAACTTCACTTGGGGCACGTGGCCAAAAGCTTTGCGTTGAAACAACAACCGTCCTTAGTTGGACAATCCTTCCAAAAGCAAAATAAGAAGAGAAAGAGATTTGAGAAGAAAAGTGGGCTATCGAAAAAGAGAAAAGTTGCTAGAGTGACTTAA | 1839 | 0.4062 | MGIKKSEKGSKKVMENKKNEKKDVGSAASNATIGNDSVFASCSFSSLGLHPSLCDELREKLGFEVPTLVQAQAIPVILAGRHALINAATGTGKTVAYLAPLIHHLQNYDTRTQRSDGTFALVLVPTRELCLQVYEILQKLLHRFHWIVPGYVMGGENRSKEKARLRKGISILIATPGRLLDHLKNTSSFLYTKLRWIIFDEADRILELGFGQDIQEILHLLGSRKAANDNKESTVPRNSEFQRQNLLFSATLNEKVNHLAKISLHNPVMIGLEGKTRKPVSTIESIDPSESDEEDEVKYSSKIATAVDYKIPTQLIQRYVKVPCGSRLAVLLSILKHLFERDTSQKVVVFFSTCDAVDFHYSLLSEFHFSTDPQTKERVIQMFLGCQTFRLHGNMEHEDRRSTFQAFKTEKSALLLSTDVSARGLDFPKVRCIIQYDSPGEATEYVHRVGRTARLGERGESLLFLQPVEIDYLQDLEKHGVSLAEYPLLKVLDNFTLHGQNKQVKKSVFIDLHPWVLCLQKALESFIISKPKMDELARKGFCSWVRAYTAHRGELKTIFMIKKLHLGHVAKSFALKQQPSLVGQSFQKQNKKRKRFEKKSGLSKKRKVARVT* | 613 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy14g0264 | 612 | CDD | DEADc_DDX31 | 53 | 271 | - | - | |
Ahy14g0264 | 612 | PANTHER | RNA HELICASE | 25 | 610 | - | - | |
Ahy14g0264 | 612 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 80 | 488 | IPR027417 | - | |
Ahy14g0264 | 612 | Pfam | Helicase conserved C-terminal domain | 333 | 456 | IPR001650 | - | |
Ahy14g0264 | 612 | Gene3D | - | 325 | 608 | IPR027417 | - | |
Ahy14g0264 | 612 | CDD | SF2_C_DEAD | 315 | 465 | - | - | |
Ahy14g0264 | 612 | PANTHER | ATP-DEPENDENT RNA HELICASE DDX31-RELATED | 25 | 610 | - | - | |
Ahy14g0264 | 612 | Pfam | DEAD/DEAH box helicase | 68 | 258 | IPR011545 | GO:0003676|GO:0005524 | |
Ahy14g0264 | 612 | SMART | helicmild6 | 374 | 456 | IPR001650 | - | |
Ahy14g0264 | 612 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
Ahy14g0264 | 612 | Pfam | Domain of unknown function (DUF4217) | 520 | 580 | IPR025313 | - | |
Ahy14g0264 | 612 | ProSiteProfiles | DEAD-box RNA helicase Q motif profile. | 42 | 71 | IPR014014 | GO:0003724 | |
Ahy14g0264 | 612 | MobiDBLite | consensus disorder prediction | 593 | 612 | - | - | |
Ahy14g0264 | 612 | SMART | ultradead3 | 62 | 286 | IPR014001 | - | |
Ahy14g0264 | 612 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Ahy14g0264 | 612 | ProSitePatterns | DEAD-box subfamily ATP-dependent helicases signature. | 198 | 206 | IPR000629 | - | |
Ahy14g0264 | 612 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 34 | 270 | IPR027417 | - | |
Ahy14g0264 | 612 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 334 | 503 | IPR001650 | - | |
Ahy14g0264 | 612 | Gene3D | - | 4 | 273 | IPR027417 | - | |
Ahy14g0264 | 612 | SMART | DUF4217_3 | 518 | 583 | IPR025313 | - | |
Ahy14g0264 | 612 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 74 | 270 | IPR014001 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy14g0264 | Ahy-Chr14 | 3850858 | 3860841 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy14g0264 | 35 | 488 | Eukaryotic Initiation Factors Gene Family | AT3G19760 | 25.328 | 1.84e-33 | 130 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy14g0264 | K14806 | - | gmx:100805157 | 940.258 |