Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy14g0248 | ATGGCATTGTGTAACAAGCTTGGAAATTTCTTGAGACAGAGTGCTTCCGGAAGTGGATTAGCACCTGCTCCATCGATGCTCAATTATATTCGCTGCATGTCCTCAAACAGGCTTTTCATTGGGGGCCTTTCATACGGAGTTGATGACCAGTCTCTTCGGGATGCATTCTCCGGCTTTGGGGATGTGGTTGATGCAAAGGTGGTCACTGATAGAGACACCGGAAGATCAAGAGGTTTTGGATTTGTCAACTTCTCAAGCGACGAGTCTGCAAGCTCAGCACTCAGTGGAATGGATGGGCAGGATCTAAACGGCCGAGTGATCAGGGTGAGCTATGCTAATGATAGGCCTACTGGACCTCGGGGTGGTGGCGGTGGTTTTGGTGGTGGTGGTGGTGGTTATGGGGGAGGTGGTTACCGTAGAGGTGGAGGTGGTGGTTATGGTGATCCAGACTTCTAG | 456 | 0.5088 | MALCNKLGNFLRQSASGSGLAPAPSMLNYIRCMSSNRLFIGGLSYGVDDQSLRDAFSGFGDVVDAKVVTDRDTGRSRGFGFVNFSSDESASSALSGMDGQDLNGRVIRVSYANDRPTGPRGGGGGFGGGGGGYGGGGYRRGGGGGYGDPDF* | 152 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy14g0248 | 151 | PANTHER | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED | 1 | 147 | - | - | |
Ahy14g0248 | 151 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 38 | 108 | IPR000504 | GO:0003723 | |
Ahy14g0248 | 151 | PANTHER | GLYCINE-RICH RNA-BINDING PROTEIN 3 MITOCHONDRIAL | 1 | 147 | - | - | |
Ahy14g0248 | 151 | SMART | rrm1_1 | 37 | 110 | IPR000504 | GO:0003723 | |
Ahy14g0248 | 151 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 36 | 114 | IPR000504 | GO:0003723 | |
Ahy14g0248 | 151 | Gene3D | - | 31 | 148 | IPR012677 | - | |
Ahy14g0248 | 151 | MobiDBLite | consensus disorder prediction | 112 | 151 | - | - | |
Ahy14g0248 | 151 | SUPERFAMILY | RNA-binding domain, RBD | 31 | 145 | IPR035979 | GO:0003676 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy14g0248 | Ahy-Chr14 | 3593601 | 3595836 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy14g0248 | 38 | 115 | Eukaryotic Initiation Factors Gene Family | AT2G23350 | 35.897 | 3.64e-09 | 52.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy14g0248 | - | - | gmx:100499841 | 190.274 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Ahy14g0248 | 14 | 3593601 | 3595836 | Ahy14g0248 | 14 | 3593601 | 3595836 | ECH |