Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4595 ATGGAATTCAGAATCTTCTTTGCTTTATCAATCATTGCTTTGAGTTGTTTCAGATGGATGAGGTTTGCAGAATCCAAATTACCACAGGAAGAAGTTGATGCTCTTGGAGAAATCACTACCATGATGGGTGTCACCCACTGGGAATTTGATGGTGATACTTGTCAAATTAAAAAGGTGACATTAGAGCCACCCAGTGAAGCTAAAAGCAGCATTGGTTGTGAGTACCATCCTGAAAAGGACAACTTCTCTCATGTAGTAAGGATTGAGTTCAAATGGTACAATCTTCCTGGCACTCTTCCACCTCAGATGGTTAAGCTTCCTTACCTCAGAGAAATTGATCTTTCTCTCAACTACCTAAATGGTACCATCCCAAAGGAATGGGCTTCAATGAAACTGACTACAATTGCTCTAATGGCTAATCGTTTATCGGGGGAGATTCCTAAGGAGTTGGGAAATATTACAACTCTAGTGAACCTGGACCTTGAAGCAAACCAATTATCTGGTCATGTACCCTCTCAACTTGGAAATCTGATTAACCTGCAAAGATTGGTTCTATCATCCAATAATTTGTCTGGGACCCTACCAGAGACATTTGCTCTATTACATAATTTGACAGAGTTTAGGATAAGTGATAATAGTTTCAGTGGAAAAATACCCAGCTTCATTCAGAACTGGAAGCTACTTCAAAGACTAGAGATGCATGCAAGTGGACTGGAGGGACCAATCCCATCAAATATATCTCTTTTGAGTAATTTAACTATTTTGAGGATTAGTGACATAGATGGTCCAAGTCAGGATTTTCCAGTTTTAAGCAGCATGAAAAAAATGAGAAGATTGGTTTTGAGAAACTGCAATATTACTGGAGAGATTCCTAGTGACATCTGGAAAATGGAGAATTTGAAAATGCTGGATGTGAGTTTTAATCAGTTGGTTGGCGAAATTCCAACTATCAAACCTGCAGCACCAATGACTTTTATCTTCCTAACTGGCAACAAACTAACTGGTAATGTACCTGACTCAATCTTGGCGGCGGGAGGCAATGTTGATCTTTCTTATAACAACCTTACGTGGCAAGGACCTGGGCAATCTGCTTGTCAAGATAACTTGAATTTAAACTTAAACTTGTTCCGGAGTTCTTTGGGGACCACAAAATTACAGGATGTTCTCCCATGTTCAAAGACCTTTAAGTGTCCTAGATACTCAAGCTGTTTGCATGTGAATAGTGGTGGAAAGGATGTAATGATGAAAGAAAATGGTCAAAATATCCTTTATATAGGGGATAGTGTGCCGGGTGGTACTGCTGAATATTATAATGACCTTAAAAAGCTTTGGGGGTTTAGCAGCACTGGTGACTTCATGGATGATGATGACATCCAAAATACACGTTACACCAAGACATTGTCACCTTCAAATTTGTCTGAATTATATGCAACGGCACGAGTGTCCCCTATTTCGCTCACCTATTTCCATTATTGCTTGGAAAATGGGAACTATACAGTAAAGCTCCACTTTGCAGAAATACAGTTTACTAATGATAGGACATGTAACAGTCTTGGGAAACGCTTATTCGATATCTATGTCCAGGATGGACTAGTTTTGAAGGATTTTAACATTGAAGAGAAAGCACATGGTGCTCAAAAACCATATATAGCAACAATTCCTAATGTCAGCGTAACAGACAATATTCTAGAGATCCGACTCTACTATGCTGGCAAGGGAACTGAAAGGGTTCCTTATCCTGCAGCTTATGGTCCCCTCATATCAGCTTTCTCTATTGTTTCTAATTCTAAACCTTGTTCAGTCCAAAAGAAAGCAGTGAATTATATAATAGTTGGAGTTGGATTTGGAATTACAGCTCTTTGCCTAGTCCTTATTATAGTAGGGATTCTTTGGTGGAAACACTTCTTCAAAGGAATAATTAGGACAGAAAAAGGTGTTGATGGACAATATAATCAGACAGGGACATATACATTAGAACAAATTAGAGCTGCCACAAATGATTTCTCTCCTGCTAACAAGATTGGGGAAGGTGGTTTTGGTCCTGTCTACAAGGGTCAGTTATCCGATGGTACTTGGGTAGCGGTCAAACAGCTTTCTTCGAAGTCACGGCAGGGGAATCGTGAATTTTTAAATGAGATAGCCATGATATCTTGTTTGCAACACCCTAATCTTGTGAAACTTCATGGATTTTGCATTGAAAACAATCAACTAATGCTGGTGTATGAGTACATGGAAAATAATAGCCTGGCTCATGCTTTATTCAGCTCAGAGAATCAGCTTAAACTTGATTGGTCAACAAGGCATAGAATCTGTATTGGCATAGCAAAAGGTCTTGCATTTCTTCATGAAGAATCTAGACTCAAGATTGTTCATCGAGATATCAAATCTACTAATGTGTTACTGGATGGGAACTTAAACCCTAAAATATCCGATTTTGGGTTGGCTAGGCTTGATGAAGAGGAAGAGACTCACATCAGCACCAGAGTGGCAGGAACAGTAGGATACATGGCACCGGAATATGCATTATGGGGTCACCTGTCTTACAAGGCTGATGTATACAGTTATGGAATTGTGGTCTTGGAAATTGTCAGTGGAAAGAACAATAAAAGTTACATGCCAAGTGATGATTGTCTTTGTCTTTTAGATAAGGCATTTCATCTTCAATCCACTGAAAACATAATGGCACTGGTTGATGAAAGGCTGGGATTAGAGGTGAACCCAACCGAAGCAGAAAACATGTTGAAAGTAGCTCTGCTGTGTACGAATGTATCGCCGTCTCTTAGGCCTACAATGTCAGAGGTTGTGAACATGCTTGAAGAAAAAACTAGCATCCCAGATGTTGTACCGGAATCTTTTTTTCGTGAAGATTTAAGGTTTAGAGCCATAAGAGACATCTATCAACACGGTGAAAATCAAAGTTTGTCTTCAAGCAAAACAGGCAGTTTAATAGGATATTTTGTACCTACTTCTTCCTCAGTCTCTGGCAATGACATGCATGAAATATGCTCAAAATCATAG 3018 0.393 MEFRIFFALSIIALSCFRWMRFAESKLPQEEVDALGEITTMMGVTHWEFDGDTCQIKKVTLEPPSEAKSSIGCEYHPEKDNFSHVVRIEFKWYNLPGTLPPQMVKLPYLREIDLSLNYLNGTIPKEWASMKLTTIALMANRLSGEIPKELGNITTLVNLDLEANQLSGHVPSQLGNLINLQRLVLSSNNLSGTLPETFALLHNLTEFRISDNSFSGKIPSFIQNWKLLQRLEMHASGLEGPIPSNISLLSNLTILRISDIDGPSQDFPVLSSMKKMRRLVLRNCNITGEIPSDIWKMENLKMLDVSFNQLVGEIPTIKPAAPMTFIFLTGNKLTGNVPDSILAAGGNVDLSYNNLTWQGPGQSACQDNLNLNLNLFRSSLGTTKLQDVLPCSKTFKCPRYSSCLHVNSGGKDVMMKENGQNILYIGDSVPGGTAEYYNDLKKLWGFSSTGDFMDDDDIQNTRYTKTLSPSNLSELYATARVSPISLTYFHYCLENGNYTVKLHFAEIQFTNDRTCNSLGKRLFDIYVQDGLVLKDFNIEEKAHGAQKPYIATIPNVSVTDNILEIRLYYAGKGTERVPYPAAYGPLISAFSIVSNSKPCSVQKKAVNYIIVGVGFGITALCLVLIIVGILWWKHFFKGIIRTEKGVDGQYNQTGTYTLEQIRAATNDFSPANKIGEGGFGPVYKGQLSDGTWVAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKLHGFCIENNQLMLVYEYMENNSLAHALFSSENQLKLDWSTRHRICIGIAKGLAFLHEESRLKIVHRDIKSTNVLLDGNLNPKISDFGLARLDEEEETHISTRVAGTVGYMAPEYALWGHLSYKADVYSYGIVVLEIVSGKNNKSYMPSDDCLCLLDKAFHLQSTENIMALVDERLGLEVNPTEAENMLKVALLCTNVSPSLRPTMSEVVNMLEEKTSIPDVVPESFFREDLRFRAIRDIYQHGENQSLSSSKTGSLIGYFVPTSSSVSGNDMHEICSKS* 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4595 1005 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 65 979 - -
Ahy13g4595 1005 SUPERFAMILY L domain-like 79 340 - -
Ahy13g4595 1005 SUPERFAMILY Protein kinase-like (PK-like) 653 940 IPR011009 -
Ahy13g4595 1005 ProSiteProfiles Protein kinase domain profile. 668 953 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g4595 1005 ProSitePatterns Serine/Threonine protein kinases active-site signature. 789 801 IPR008271 GO:0004672|GO:0006468
Ahy13g4595 1005 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Ahy13g4595 1005 Pfam Protein tyrosine and serine/threonine kinase 672 938 IPR001245 GO:0004672|GO:0006468
Ahy13g4595 1005 CDD STKc_IRAK 674 940 - -
Ahy13g4595 1005 Gene3D Ribonuclease Inhibitor 262 380 IPR032675 -
Ahy13g4595 1005 Pfam Leucine rich repeat 155 213 IPR001611 GO:0005515
Ahy13g4595 1005 Gene3D Ribonuclease Inhibitor 39 195 IPR032675 -
Ahy13g4595 1005 Gene3D Ribonuclease Inhibitor 196 261 IPR032675 -
Ahy13g4595 1005 SMART serkin_6 668 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g4595 1005 Gene3D - 401 597 - -
Ahy13g4595 1005 PANTHER RECEPTOR-LIKE KINASE IN FLOWERS 1-RELATED 65 979 - -
Ahy13g4595 1005 Pfam Malectin domain 403 590 IPR021720 -
Ahy13g4595 1005 Gene3D Phosphorylase Kinase; domain 1 640 743 - -
Ahy13g4595 1005 Gene3D Transferase(Phosphotransferase) domain 1 744 947 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4595 Ahy-Chr13 146319832 146326491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g4595 7 833 Receptor kinase-like Gene Family AT1G29750 59.233 0.0 983
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy13g4595 PK_Tyr_Ser-Thr 6.70E-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4595 - - vra:106779815 1328.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4595 13 146319832 146326491 Ahy3g4342 3 143426159 143433505 hybridization
Ahy13g4595 13 146319832 146326491 Ahy20g0278 20 2944606 2951503 PCT
Ahy13g4595 13 146319832 146326491 Ahy10g0088 10 967974 974905 PCT
Ahy20g0278 20 2944606 2951503 Ahy13g4595 13 146319832 146326491 PCT
Ahy10g0088 10 967974 974905 Ahy13g4595 13 146319832 146326491 PCT