Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4590 ATGAAGTGGGGTGGAAGAAAATCATCACCAGCTTCTTCTTCTAATAGTATTAATAATAATACTAAGCATTCTTTCATCTCTCAAGTGTCTCCTTTTTCATGGCTGTCCAAGTTCAAGCAGATGAGGATTAACTCGGAGCGAAAGCCGGGGCAGAATGCAAAGCAGAATTCTGTTCCATCTTATGGTTCAGCACCAAAGGATGCATGTGGGAATAGAGGTAGGTTTTATGGAGGGGAAGATGATGCCTTCTGGAGACTCTCATTTGGTGAAGAGAGTCATGAGCATAACAAGAGTAGTGAAGATATCTTGAAATCAACACTGCACAATTTGGATGGTGATCATGCCAATGATGTCATTCAGTCCTCAGCACAATTTGGACCGAGTGATAAAAGACATGGAAGAAGAGATGCTAGTCTGAGGTTCAAGCAGAAGGATATTGGAATGGGAGAGGAAAGAAAGTTGCCAAGTGAGAATGAGTGTGATCATGGAGGAAAGGAATTTGAATTCTTAAGGAGGAGATATGAAAGGAAAGCACAAAAGGTTTTTCAAGATCAACTCTTGAAACTAGAAAAAGCTGCAGATAATCTAGAATCTGAATTTGCATCTAGCAACTCTAAGTCCTTGGAAAATGATGTGCTGAAATCCGAATCGCCTAGAACGATTCGAACACCAAGAACAAATTCGTACATGTCCTCTGTAAATTCAAAGAATTCTGGCCATGGAAATATTAAAGAAGGTGGTGTTAACTCTGGGAAGAATACTGAAGAGTTGAGAGTGAAGGTTAACAAGAAAAGGCAATCACTTCATGTAAGCAAAGAACTTCAGAGGAGGAAGCCAAGGAATAGTCCAAGGGTAAGAGTGCATTCTCCGAGGATGGCTTCCAAGGTCGAAATCTGCAAAATAAAGGCCATAGAAGACATGAAGAAAGCAAAACTAAAGATGAAGAAAGAGGAGGAAATTTCAGAGGAAACGGCAGGCGTAGACAGCTTTGCTGTGGTGAAATGCTCAATGGATCCGCAACAAGACTTCAGAGATTCGATGATGGAGATGATCGTGCAGAGGAAGATCAGCAGGCCAGAAGAAATGGAGGAGCTGTTGGCATGTTATCTCACACTGAATTCTAGTGAGTATCATGATATCATCATCAAGGTTTTCAGGGAGGTGTGGTTATATGTGAACAAGGTTTGTTGTCTTAAATCAGAAGCAATGCAGTTGCAATGA 1221 0.4103 MKWGGRKSSPASSSNSINNNTKHSFISQVSPFSWLSKFKQMRINSERKPGQNAKQNSVPSYGSAPKDACGNRGRFYGGEDDAFWRLSFGEESHEHNKSSEDILKSTLHNLDGDHANDVIQSSAQFGPSDKRHGRRDASLRFKQKDIGMGEERKLPSENECDHGGKEFEFLRRRYERKAQKVFQDQLLKLEKAADNLESEFASSNSKSLENDVLKSESPRTIRTPRTNSYMSSVNSKNSGHGNIKEGGVNSGKNTEELRVKVNKKRQSLHVSKELQRRKPRNSPRVRVHSPRMASKVEICKIKAIEDMKKAKLKMKKEEEISEETAGVDSFAVVKCSMDPQQDFRDSMMEMIVQRKISRPEEMEELLACYLTLNSSEYHDIIIKVFREVWLYVNKVCCLKSEAMQLQ* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4590 406 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 330 391 IPR006458 -
Ahy13g4590 406 PANTHER TRANSCRIPTION REPRESSOR OFP4 9 394 - -
Ahy13g4590 406 MobiDBLite consensus disorder prediction 41 73 - -
Ahy13g4590 406 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 9 394 IPR038933 GO:0045892
Ahy13g4590 406 Coils Coil 179 206 - -
Ahy13g4590 406 MobiDBLite consensus disorder prediction 256 280 - -
Ahy13g4590 406 Pfam Transcriptional repressor, ovate 336 390 IPR006458 -
Ahy13g4590 406 ProSiteProfiles OVATE domain profile. 332 391 IPR006458 -
Ahy13g4590 406 MobiDBLite consensus disorder prediction 7 22 - -
Ahy13g4590 406 MobiDBLite consensus disorder prediction 1 22 - -
Ahy13g4590 406 MobiDBLite consensus disorder prediction 201 289 - -
Ahy13g4590 406 MobiDBLite consensus disorder prediction 41 62 - -
Ahy13g4590 406 MobiDBLite consensus disorder prediction 219 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4590 Ahy-Chr13 146249078 146250298 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Ahy13g4590 Ovate 1.80E-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4590 - - ahf:112792751 721.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4590 13 146249078 146250298 Ahy3g4337 3 143370851 143371951 hybridization
Ahy13g4590 13 146249078 146250298 Ahy20g0290 20 3022628 3024165 PCT
Ahy13g4590 13 146249078 146250298 Ahy10g0100 10 1029478 1031141 PCT
Ahy20g0290 20 3022628 3024165 Ahy13g4590 13 146249078 146250298 PCT
Ahy10g0100 10 1029478 1031141 Ahy13g4590 13 146249078 146250298 PCT