Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4580 ATGGGAAGCAAAGATGTGAAGGTGTTGAACTTTTGGGTGAGTCCGTTCGGTAAAAGAGTTGAGTGGGCACTGAAACTGAAGGGTGTGGAATACGAGTACATAGAAGAAGATATATCCAACAAGAGCAACCTCCTTCTTGAGCTGAACCCGGTTTACAAGAAGGTTCCAGTTCTTGTTCATGGCAACAAGGCAATCGCGGAGTCATTTGTGATCCTCGAATACATCGATGAAACATGGAAGCAGTACCCGTTGATGCCTCACGATCCTTATGAAAGGGCTCATGCTCGCTTTTGGGCTACTTCTGCTCAACAAAAGCTTGGGAAGGAAGGGTCATGGACTGCGCTGATTAAGAGCGGAGAAGAAAAGGAAAAGGCTCTGAATACAGCCTCAGAGGTACTTGAGAAGTTAGAGGAAGAGATTAAGGGTAAGAAATTCTTTGGAGGGGACAACATTGGATACCTCGACATTGCACTTGGTTGGATCTCTTACATTATTCCCATCTGGGAGGAAGTTGGGTCAATACAAATAATTGATCGTCTGAAATTCCCAGCCATCAATGAATGGATGACCAATTTCCTCAACCACCCTGTGGTCAAGGATTCCTTGCCCCCAAGAGACAAGGCCCTTGATTACTACCACCTCTCAGTAAAGAAACATACTCCTAATTAA 669 0.4484 MGSKDVKVLNFWVSPFGKRVEWALKLKGVEYEYIEEDISNKSNLLLELNPVYKKVPVLVHGNKAIAESFVILEYIDETWKQYPLMPHDPYERAHARFWATSAQQKLGKEGSWTALIKSGEEKEKALNTASEVLEKLEEEIKGKKFFGGDNIGYLDIALGWISYIIPIWEEVGSIQIIDRLKFPAINEWMTNFLNHPVVKDSLPPRDKALDYYHLSVKKHTPN* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4580 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 211 IPR010987 -
Ahy13g4580 222 Pfam Glutathione S-transferase, N-terminal domain 6 77 IPR004045 -
Ahy13g4580 222 Coils Coil 119 139 - -
Ahy13g4580 222 CDD GST_C_Tau 89 211 IPR045074 GO:0004364|GO:0006749
Ahy13g4580 222 CDD GST_N_Tau 6 79 - -
Ahy13g4580 222 Gene3D Glutaredoxin 1 84 - -
Ahy13g4580 222 SFLD Glutathione Transferase (cytosolic) 2 218 IPR040079 -
Ahy13g4580 222 SFLD Main.3: Omega- and Tau-like 2 218 IPR045073 -
Ahy13g4580 222 SUPERFAMILY GST C-terminal domain-like 77 217 IPR036282 -
Ahy13g4580 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Ahy13g4580 222 Pfam Glutathione S-transferase, C-terminal domain 119 196 IPR004046 -
Ahy13g4580 222 Gene3D - 85 221 - -
Ahy13g4580 222 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 215 IPR045073 -
Ahy13g4580 222 SUPERFAMILY Thioredoxin-like 5 103 IPR036249 -
Ahy13g4580 222 PANTHER GLUTATHIONE S-TRANSFERASE 1 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4580 Ahy-Chr13 146202058 146203160 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g4580 2 218 Glutathione S-transferase Gene Family AT2G29420 43.318 3.48e-66 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4580 K00799 - gmx:100305870 343.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4580 13 146202058 146203160 Ahy3g4329 3 143330361 143331653 hybridization