Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4574 ATGGATAGTAAGTTGAGGAACAGGAGTAGTAGGAGTAGCAGAAATCTGTATATGAAGGAACAAGAAGACAATGATGGTGCGGACTCCCCTCCTTCAAATTCCACCCTCTTCAACATTGATGCCTTGGTTACTTCTTCTCCATCATCTTCAAGTAAGAGAAGCAGGCGAGGCGTAGAAAAAAGGGTGGTGCATATAAGAATAAAGGAGGGAGAAGGACCAAGGCTAAAAGGGGAAAACAACACTCCACCACCCTCAGATTCATGGGCATGGAGGAAGTATGGCCAGAAACCCATAAAAGGTTCCCCTTACCCGAGAGGATACTACAGATGTAGCAGCTCAAAGGGGTGTCCGGCGAGAAAGCAGGTAGAGAGAAGCCGAGTGGACCCCACTATGCTGGTAGTTACATATTCATGCGAACACAACCATCCATGGCCTTCTTCACGAAACCACAATAGATCGTCTAATAAGAAGCCCCAGCCCTCCGCCGAGGACCTACTTGTGGACCCGGTCGAACCGGATCTTGAGGGCCACGACTCCATCATTCATGACCTTGGCTGGTTCCGTGACATCTCGGGGGCTCCCACCACGTCTTCGCCCGCCGTACTGGACAGCCCCATATTCTCTGGCTACGACGATGCGGATGTGGCGGCCTCGGTGGTGCTGCCCATGGGGGACGACGACGACTCGCTCTTTGCGGACCTCGGAGAGCTGCCCGAGTGCTCCCTTGTGTTCCGGCGGGGGCTCTTGGAGACGGCGGAGCAACGGCGGCGCTGGTGTGGGACCCCAAGTTGA 792 0.5429 MDSKLRNRSSRSSRNLYMKEQEDNDGADSPPSNSTLFNIDALVTSSPSSSSKRSRRGVEKRVVHIRIKEGEGPRLKGENNTPPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPTMLVVTYSCEHNHPWPSSRNHNRSSNKKPQPSAEDLLVDPVEPDLEGHDSIIHDLGWFRDISGAPTTSSPAVLDSPIFSGYDDADVAASVVLPMGDDDDSLFADLGELPECSLVFRRGLLETAEQRRRWCGTPS* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4574 263 SMART WRKY_cls 84 144 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy13g4574 263 Gene3D WRKY domain 73 146 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy13g4574 263 PANTHER OS01G0750100 PROTEIN 19 261 - -
Ahy13g4574 263 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 19 261 IPR044810 GO:0003700
Ahy13g4574 263 SUPERFAMILY WRKY DNA-binding domain 81 145 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy13g4574 263 MobiDBLite consensus disorder prediction 1 26 - -
Ahy13g4574 263 ProSiteProfiles WRKY domain profile. 85 145 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy13g4574 263 MobiDBLite consensus disorder prediction 27 52 - -
Ahy13g4574 263 MobiDBLite consensus disorder prediction 1 101 - -
Ahy13g4574 263 MobiDBLite consensus disorder prediction 143 160 - -
Ahy13g4574 263 Pfam WRKY DNA -binding domain 86 143 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy13g4574 263 MobiDBLite consensus disorder prediction 143 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4574 Ahy-Chr13 146156584 146158007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g4574 20 245 WRKY Transcription Factor Family AT1G29280 51.852 8.43e-73 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy13g4574 WRKY 2.80E-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4574 - - ahf:112734976 506.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4574 13 146156584 146158007 Ahy3g4323 3 143285044 143286283 hybridization