Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4569 ATGAAGACTTCTGAGGAATGGAAACCTTTTATGGTAATGATAGCAATTGATTTTTCTTCCACCATAGTGAACATTCTTCTAAAGAAAGTTCTTGAGGAAGGGATGGACCATTTGGTGTTTATCACATACCGTTTGTCAATTTCAACCATTTTCCTAGTCCCTATCAGCTACTTTTGGGAAAGAAACGGAAGACCAAGGCTCACATTTAGAATTTTGTGTTACCTTTTCTTCAGTGCCATTGTTGGGGCATCAGTCACACAGTACTTCTTCCTTCTTGGGATCCAATACACCTCTGCTACCTTTGCTTGTGCCTTTGTCAATATGGTACCTGTGATCACATTCATTATGGCATTGCCATTTGGATTAGAGACTCTGAACATCAAATGTAACAGTGGGAAAGCCAAGATTCTTGGTACACTGGTGTGTGTAGGAGGGGCATTGTTGTTGACACTTTATAAAGGAAAGCCCTTGTTTGATGTTTCTCACTATGAGTCTGCAGCAGCATCAACAGGCGTGAGATCTGCAATGAAGCAACGTTCTTCTCCACCTACTAGAATCATTGAGAAATGGACCATTGGTGTAATAGCTTTGATTCTGGGAACACTGTTTTGGTCTTCATGGTTTATCTTGCAATCAACTATAGGGAAGCTCTATCCATGCCGGTATTCTAGCACAGCCATCATGACTTTGTTTGGAGCCATTCAATCAGCCATCCTTGCTTTGTCCACTGGCAGAGACTTGTCCATGTGGATCCCCAATGGCAGGATACAAATACTCACTGTTCTCTATTCTGGCATGGTTGGGTCAGGGTTGTGCTATGTGGGGATGTCATGGTGTGTTAAAAAGAGGGGTCCTGTGTTTACTGCAGCATTTAGCCCTCTTGTTCAGATAATGTCAGCCATGATTGATATCCCAGTCTTGCATGAGCAGCTCCATCTTGGAAGTGTGTTGGGATCCATGCTGGTAATGGTGGGATTGTATATTCTTCTGTGGGGTAAGAGCAAGGATAATCAGAATCGTGTGACAAATTTAGTAGAAGAAGGTGGAAACAAGGAACAAGTCCCTCCCCCACAAACAACACGACATGTTGCTATAACCTGCGATACACGCTCTAACTGA 1119 0.429 MKTSEEWKPFMVMIAIDFSSTIVNILLKKVLEEGMDHLVFITYRLSISTIFLVPISYFWERNGRPRLTFRILCYLFFSAIVGASVTQYFFLLGIQYTSATFACAFVNMVPVITFIMALPFGLETLNIKCNSGKAKILGTLVCVGGALLLTLYKGKPLFDVSHYESAAASTGVRSAMKQRSSPPTRIIEKWTIGVIALILGTLFWSSWFILQSTIGKLYPCRYSSTAIMTLFGAIQSAILALSTGRDLSMWIPNGRIQILTVLYSGMVGSGLCYVGMSWCVKKRGPVFTAAFSPLVQIMSAMIDIPVLHEQLHLGSVLGSMLVMVGLYILLWGKSKDNQNRVTNLVEEGGNKEQVPPPQTTRHVAITCDTRSN* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4569 372 Pfam EamA-like transporter family 12 150 IPR000620 GO:0016020|GO:0016021
Ahy13g4569 372 Pfam EamA-like transporter family 192 330 IPR000620 GO:0016020|GO:0016021
Ahy13g4569 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 153 - -
Ahy13g4569 372 PANTHER WAT1-RELATED PROTEIN 9 350 - -
Ahy13g4569 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 335 - -
Ahy13g4569 372 PANTHER WAT1-RELATED PROTEIN 9 350 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4569 Ahy-Chr13 146057193 146059829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g4569 4 264 Nodulin-like Gene Family AT3G30340 47.510 3.06e-87 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4569 - - gmx:100791663 546.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4569 13 146057193 146059829 Ahy3g4318 3 143212046 143214580 hybridization
Ahy13g4569 13 146057193 146059829 Ahy20g0308 20 3207528 3211839 PCT
Ahy13g4569 13 146057193 146059829 Ahy10g0119 10 1231797 1235866 PCT
Ahy20g0308 20 3207528 3211839 Ahy13g4569 13 146057193 146059829 PCT
Ahy10g0119 10 1231797 1235866 Ahy13g4569 13 146057193 146059829 PCT