Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4561 ATGTTCTCTCCTCTCCCACCTGCCACGGTAACAACAACACTAGAACTAGAGCTCATGAAGCCCCTCTGCAGATTCTTAATAGTAGCCATGGCGGTGTTTTCTGTGGTGGAATCTTCCAAATCTATATCTTCATGCAACACCGGCAGCAGTAGCGTAGAGCAGAGGCTGGTAGCAAAGGCTTTCAAGTCTGTATCCGGCTTCAACTCTTCCTCCTCCTGGTTCCGAAAAGGAGTATTACTTTCCAACTGTTCATCCCAATCTCATGTCATCAGCATAAACCTTCCATCCAAGAATCTCACCGGAACCATCTCCTGGGGTTATCTCATCAACATCTCAAACCTCCAGCTTCTTGATCTCTCAGGGAATTCCTTACAAGGCCGTGTCCCAACTTGGTTATGGTCAACCTCATCCTTACGTCACCTAAACCTCTCCAACAACAGGTTTGGAGGTAGCGTCGTCTTCACTACCACCGCCGTCATTCAAACGCTCAACCTCTCCCACAACAGGTTCACCAATTGGGTGGTCCAACACCATCCATATCAACGCTACTCTTCCTTCTTCCCAAACCTTAAAATCCTTGACCTCTCTCACAACCACTTAAGGACACCCCTCCCTTCAGGCTTCACCAACCTCACCAACCTTCAATACCTTGACTTATCAAACAACAACCTCACCGGAACTTTCCCTTCCGATTTTCCTCCACTCAACAACCTCCACTTCCTAAACATCTCTTTCAACCGCTTCAACTCAACCGTTAGCCTCAACAAGTTCAACAAATTCGGCAAAGCCGCCTTTATCCACGCTGGCAAGAATTTCACCTACACCGCCACTACTCCAACTCACAGCAACAACCATTCCGCAACTACCACCCCAGCCTCACAAGTCATTCACACAAGATACAAACACAAACACAAACACAAGACACACATTATTATCGCGGTTTCGTGTGCTTCTTCCTTAGCGGTTATTTTTATCATTTGGGCGCTACTACGCATTGCTAGGAAGAAGAAGAAGGAGCGTTGCAAGATTAAGAAATGGGCAATATCGAAAGCGGAGGACATGATGAGCGGCGTGATGGTGGAGAAATCAGGGCCGTTCGAGTTCGAGACTGAGTCAGGGTCCACGTGGGTGGCTGATCTGAAGGAACCATGTTCTGCGGCCGTGGTGATGTTCGAGAAGCCGTTGATGAGCCTGACCTTCAGGGACCTCATCGCTGCCACGTCACACTTCGGGAAGGAGTCACTCCTGGCGGAAGGCAGGTGTGGACCCCTCTACAGGGCTGTACTCCCCGGCGATCTCCACGTGGCAATCAAGGTACTGGAATACGCCAGGGACGTTGATCCTCGTGACTCCATTGCAATGTTCGTTGACCTCTCAAAGCTCAAGCACCCAAATTTGTTGCCCCTCTCTGGTTACTGCATTGCAGGTAAGGAGAAGCTGGTACTGTACGAGTTTATGGCAAACGGCGATTTGGGGAGGTGGCTACACGAGCTTCCAACGGGGGACACCAACGTGGAGGACTGGACACGCGACACGTGGGAGATTCAAAACGGCGTCGTTGAGGGGTCATCAGAGAAAATGGGGTGGCTAACACGTCACCGTATTGCGGTTGGGATAGCGCGTGGACTAGCTTACCTTCACCACGCGGGTTCCAAACCCGTCGTGCACGGCCACCTCGTTACCTCCAACATTCTACTCGCCGACGATTTCGAGCCACGAATATCGGATTTCGGGCTGCGGGGAGAACCGAATCCGAATTGCGGGACGGAGGGTGACGTGTACTGCTTCGGGATGGTGCTGATGGAGATGTTGACAGGGAAGGGAGGGACGGAGGAAACGGTGAGCGCGGTGAGGAAGGCGGTGAGGGAAGGGGAGGGGGTTAGGGTTCTGGAGGAGAGGCTGCTAGTGGGCGGTGAGTGGGAGAGTGAGATGGTGGAGAGCCTCCGAGTGGCGTACCTTTGCACAGCTGAGTCGCCTTCCAAGAGGCCCACTATGAGGCAGGTTTTGGGCTTGCTCAAAGACATTAGTCCAAACCAACCACTCACCCCGAGTTGA 2055 0.5202 MFSPLPPATVTTTLELELMKPLCRFLIVAMAVFSVVESSKSISSCNTGSSSVEQRLVAKAFKSVSGFNSSSSWFRKGVLLSNCSSQSHVISINLPSKNLTGTISWGYLINISNLQLLDLSGNSLQGRVPTWLWSTSSLRHLNLSNNRFGGSVVFTTTAVIQTLNLSHNRFTNWVVQHHPYQRYSSFFPNLKILDLSHNHLRTPLPSGFTNLTNLQYLDLSNNNLTGTFPSDFPPLNNLHFLNISFNRFNSTVSLNKFNKFGKAAFIHAGKNFTYTATTPTHSNNHSATTTPASQVIHTRYKHKHKHKTHIIIAVSCASSLAVIFIIWALLRIARKKKKERCKIKKWAISKAEDMMSGVMVEKSGPFEFETESGSTWVADLKEPCSAAVVMFEKPLMSLTFRDLIAATSHFGKESLLAEGRCGPLYRAVLPGDLHVAIKVLEYARDVDPRDSIAMFVDLSKLKHPNLLPLSGYCIAGKEKLVLYEFMANGDLGRWLHELPTGDTNVEDWTRDTWEIQNGVVEGSSEKMGWLTRHRIAVGIARGLAYLHHAGSKPVVHGHLVTSNILLADDFEPRISDFGLRGEPNPNCGTEGDVYCFGMVLMEMLTGKGGTEETVSAVRKAVREGEGVRVLEERLLVGGEWESEMVESLRVAYLCTAESPSKRPTMRQVLGLLKDISPNQPLTPS* 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4561 684 ProSiteProfiles Protein kinase domain profile. 410 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g4561 684 SUPERFAMILY Protein kinase-like (PK-like) 400 677 IPR011009 -
Ahy13g4561 684 Gene3D Ribonuclease Inhibitor 30 308 IPR032675 -
Ahy13g4561 684 Pfam Protein tyrosine and serine/threonine kinase 414 580 IPR001245 GO:0004672|GO:0006468
Ahy13g4561 684 PANTHER KINASE, PUTATIVE-RELATED 216 680 - -
Ahy13g4561 684 PANTHER KINASE, PUTATIVE-RELATED 21 226 - -
Ahy13g4561 684 SMART LRR_typ_2 211 234 IPR003591 -
Ahy13g4561 684 SMART LRR_typ_2 111 135 IPR003591 -
Ahy13g4561 684 SMART LRR_typ_2 187 210 IPR003591 -
Ahy13g4561 684 ProSiteProfiles Leucine-rich repeat profile. 213 234 IPR001611 GO:0005515
Ahy13g4561 684 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 216 680 - -
Ahy13g4561 684 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 21 226 - -
Ahy13g4561 684 Pfam Leucine rich repeat 97 148 IPR001611 GO:0005515
Ahy13g4561 684 Pfam Leucine rich repeat 188 248 IPR001611 GO:0005515
Ahy13g4561 684 Gene3D Phosphorylase Kinase; domain 1 370 485 - -
Ahy13g4561 684 Gene3D Transferase(Phosphotransferase) domain 1 486 583 - -
Ahy13g4561 684 Gene3D Transferase(Phosphotransferase) domain 1 584 681 - -
Ahy13g4561 684 SUPERFAMILY RNI-like 79 252 - -
Ahy13g4561 684 PRINTS Leucine-rich repeat signature 114 127 - -
Ahy13g4561 684 PRINTS Leucine-rich repeat signature 211 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4561 Ahy-Chr13 145998269 146001203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g4561 89 675 Receptor kinase-like Gene Family AT5G07280 30.093 9.18e-73 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Ahy13g4561 PK_Tyr_Ser-Thr 2.60E-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4561 - - gmx:100788556 798.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4561 13 145998269 146001203 Ahy3g4311 3 143140856 143143642 hybridization
Ahy13g4561 13 145998269 146001203 Ahy20g0332 20 3471943 3474805 PCT
Ahy13g4561 13 145998269 146001203 Ahy10g0144 10 1396375 1399526 PCT
Ahy20g0332 20 3471943 3474805 Ahy13g4561 13 145998269 146001203 PCT
Ahy10g0144 10 1396375 1399526 Ahy13g4561 13 145998269 146001203 PCT