Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4560 ATGGCTGAGGCAGTGGTGGTTCCCAACAAGAACAAGGAGAGCAGCCTCCTCCTGGGCCGCTTCGAGATAGGAAAGCTCCTGGGCCACGGAACCTTCGCGAAGGTGTACCACGCGCGCAACATCAAGACCGGTGAGGGCGTCGCCATCAAGGTCATCGACAAGGAGAAGATCCTCAAGGGCGGCCTCGTCTCCCACATCAAGCGCGAGATCTCCATCCTCCGCCGCGTCCGCCACCCTAACATCGTCCAGCTCTTCGAAGTTATGGCCACCAAATCCAAGATCTACTTCGTCATGGAGTACGTCCGCGGCGGCGAGCTCTTCAACAAGGTCGCCAAAGGCCGCCTCAAGGAAGACCTCGCTCGAAAGTACTTCCAGCAACTCATCTCCGCCGTCTCCTTCTGCCACAACAGAGGCGTCTTCCACCGCGACCTAAAACCGGAGAATCTCTTGCTGGACGAGAACGGCGACCTTAAGGTCTCCGATTTCGGCCTGAGCGCCGTTTCTGATCAGATTAGGCAGGATGGCTTGTTCCACACCTTTTGCGGAACCCCTGCTTACGTGGCACCTGAGGTTCTTGCCAGGAAGGGTTACGACGCAGCGAAGGTTGATATCTGGTCCTGTGGCGTCGTTTTGTTCGTTCTCATGGCTGGCTATTTACCTTTCCATGATCGCAACGTTATGGCTATGTATAAGAAGATCTACAAGGGCGAGTTTCGCTGTCCTAGGTGGTTTTCCCCCGAATTGTCCAGGCTTGTTGCTAAGCTTCTTGATACTAATCCTGACAGGAGGATTTCCATTCCGGACATCATGGAGAATCGCTGGTTCAAGAAAGGCTTTAAGCAGATTAAGTTCCATATTGAGGATGACAATAAGGTTGTGCAGCACGTTGCTGGTGGTGGTAATGATGCTGATTCTTCATCTGATTTGTCAGAAACAGATGAGTTTGAGGCCGAGGAAAGTGCCAGGAGGAGGAGGAGGAACAGCGCTTTGTTGCCACGGCCGGCGAGTTTGAATGCGTTTGATATCATATCGTTTTCTCCTGGTTTTGATCTCTCTGGCTTGTTTGAGGAGAAGGGTGACGAGGCGAGGTTTGTTTCCGGTGCGCCGGTTTCCAAGATCATATCGAAATTGGAGGAGATTGCTCAGTTGGTGAGCTTCACGGTGAGGAAGAAGGACTGCAGGGTAAGTTTGGAAGGTTCCAGAGAAGGCGTGAAGGGACCACTTACCATTGCTGCTGAGATTTTTGAGTTGACGCCTTCTCTGGTTGTGGTGGAGGTGAAGAAGAAAGGAGGGGATAGAGAGGAGTATGAGAGGTTCTGCAACACTGAATTGAAGCCAGGGTTGCAGAATTTGATGGTTGAGGACGAATCTCAACCTCAGTCTCACTCGGAAACTGCAACTGCATCTTCTTCACCATTACCTTCACCCACTGATGAACTCTCTCAACTGCGTACACTTTCTGACTCTGCAATCCACTTACCTTCTGAACTTGAATCTTTGAACCTAGATACATGA 1515 0.5142 MAEAVVVPNKNKESSLLLGRFEIGKLLGHGTFAKVYHARNIKTGEGVAIKVIDKEKILKGGLVSHIKREISILRRVRHPNIVQLFEVMATKSKIYFVMEYVRGGELFNKVAKGRLKEDLARKYFQQLISAVSFCHNRGVFHRDLKPENLLLDENGDLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLARKGYDAAKVDIWSCGVVLFVLMAGYLPFHDRNVMAMYKKIYKGEFRCPRWFSPELSRLVAKLLDTNPDRRISIPDIMENRWFKKGFKQIKFHIEDDNKVVQHVAGGGNDADSSSDLSETDEFEAEESARRRRRNSALLPRPASLNAFDIISFSPGFDLSGLFEEKGDEARFVSGAPVSKIISKLEEIAQLVSFTVRKKDCRVSLEGSREGVKGPLTIAAEIFELTPSLVVVEVKKKGGDREEYERFCNTELKPGLQNLMVEDESQPQSHSETATASSSPLPSPTDELSQLRTLSDSAIHLPSELESLNLDT* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4560 504 MobiDBLite consensus disorder prediction 297 327 - -
Ahy13g4560 504 SMART serkin_6 21 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g4560 504 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 14 466 - -
Ahy13g4560 504 MobiDBLite consensus disorder prediction 454 487 - -
Ahy13g4560 504 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Ahy13g4560 504 Gene3D Transferase(Phosphotransferase) domain 1 11 331 - -
Ahy13g4560 504 CDD STKc_SnRK3 20 274 - -
Ahy13g4560 504 ProSiteProfiles Protein kinase domain profile. 21 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g4560 504 Pfam NAF domain 334 390 IPR004041 GO:0007165
Ahy13g4560 504 CDD CIPK_C 338 449 - -
Ahy13g4560 504 ProSiteProfiles NAF domain profile. 332 356 IPR018451 GO:0007165
Ahy13g4560 504 SUPERFAMILY Protein kinase-like (PK-like) 17 276 IPR011009 -
Ahy13g4560 504 Pfam Protein kinase domain 21 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g4560 504 Gene3D Kinase associated domain 1, KA1 332 453 - -
Ahy13g4560 504 PANTHER - 14 466 - -
Ahy13g4560 504 ProSitePatterns Protein kinases ATP-binding region signature. 27 50 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4560 Ahy-Chr13 145982848 145984940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g4560 10 478 CBL-interacting serine-threonine protein kinases AT4G18700 76.891 0.0 741
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Ahy13g4560 Pkinase 1.80E-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4560 - - gmx:100790133 756.133