Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4558 ATGGAAAGTAAATGGGGCCCCTTTGGGTTATGCCTTTGGAGTTACATTCTATTGATTTCTGCGTGTGGAATTCAGCAGTCTTGCTCTCTGAATGATGAAGAAACAGGATTGGCTCTACTGAAATTTCGGCTGACTGATCCTTACGGCGCTCTAGCAAATTGGAATTCAAATGATTATGATGCCTGCAAGTGGTCAGGTGCCCATTGTGTTGATGGTAAAGTGAACATGCTGTTGGCTTGTGGCAATACAATTGAAGTCGTTGAGCATTATTCATCTCTGAAAACTTCACCTCACCTCAGAAATAGAAAGTTGGCACAATGGTTCAAGTCAGAGAAGGCCTCCTCTCATGGAATCAGAGGGAATAACTGTGACAATTTGCCCGGTTCTGATGGGATAGAGACTGCTCCAAGTACATCAAATCTAGTCAATACTGCACGCCGACGGTTGCTTGATGAGTCCAGCAGTAACCTTGCCGCTGCACCTTTTGCCGGGGCGCCTGTACCGATTAGTTCCGTTCCAACTACCCTGAGTAGTGGATCTTTCCCAGCTGTACCAGTTTCCAAACAAACTGATTCACCCAACTCACCACCTTCAAGTTCTAATTCTCCTCCAAACGATAGTCCTTCTTCAAATGAAAATGGTTCAAGCCCGTGGAAGATTGTTGTTATTGTTATATGTGTGCTTCTCTTGGTCATTATTATTTTGGTCCTTCTTTGGATTTGGAGAAAACGAGCTGTAAAAGTAATAAAGCCCTGGAGGACAGGAATAAGTGGACAGTTGCAGAAAGCATTTGTAACAGGTGTCCCAAAATTGAACCGAGCGGAGCTGGAGACAGCTTGTGAAGATTTCAGCAATATCATTTATGATTTAGGTTCATGCACCATATACAAAGGAACTCTGTCCAGTGGCGTTGAGATTGCTGTTGCTTCTACTACTATTACTTCTTCAGCACATTGGACAAAGAGCATGGAGATGGCATATCGAAAAAAGCTTGATATTTTGTCCCGTATTAACCACAAGAACTTCACCAATCTAATTGGTTACTGTGATGAAGAACAACCCTTCACAAGGATGATGGTGTTTGAGTATGCTCCAAGTGGAACCCTATATGATCACCTGAATGTTCCTGAAGTTGAACACCTTGATTGGAGTGCAAGGATGAGGGTTATTATGGGCACTGCTTATTGTCTTCAGTACATGCACCATGATCTCAATCCACCAATAGCTCATTCCGAGCTGAGTTCAGATGCTATTTTATTAACTGATGACTTTGCAGCTAAGATTGCAGAGGTAGTTTTTTGCAAGAATGTAGTATCGCCAACCAAAACAACTGAAGGCGAATCAAAGCAATTCGAGTTGCCGCCTGAGTGCTGTCCTGAAAACGATGTCTATAGATTTGGAGTTTTATTGCTTGAAATCATTACTGGGAAGCTACCATACCAGGACCATGGCAACCTTACTGTCCTTGCAGACTGGTCTGCTAAGTACTTGCGTGAGAAGACAAGCGACCGCTCTATTGTTGATCCGACGCTGCAATCATTCAAAGATGAAGAACTGAGTGTGATATTTGATGTGATCCATGAATGCACTCAATCAGATGCAAGTGTAAGACCAACAATGAAGGATGTAACTCTCAAGCTGAGGGATGCGCTTAAAATATCGCCCGACCAAGCCGTCCCAAGACTTTCTCCACTCTGGTGGGCTGAACTCGAGATCTTGTCAATGGAGGGCACTTAA 1737 0.4347 MESKWGPFGLCLWSYILLISACGIQQSCSLNDEETGLALLKFRLTDPYGALANWNSNDYDACKWSGAHCVDGKVNMLLACGNTIEVVEHYSSLKTSPHLRNRKLAQWFKSEKASSHGIRGNNCDNLPGSDGIETAPSTSNLVNTARRRLLDESSSNLAAAPFAGAPVPISSVPTTLSSGSFPAVPVSKQTDSPNSPPSSSNSPPNDSPSSNENGSSPWKIVVIVICVLLLVIIILVLLWIWRKRAVKVIKPWRTGISGQLQKAFVTGVPKLNRAELETACEDFSNIIYDLGSCTIYKGTLSSGVEIAVASTTITSSAHWTKSMEMAYRKKLDILSRINHKNFTNLIGYCDEEQPFTRMMVFEYAPSGTLYDHLNVPEVEHLDWSARMRVIMGTAYCLQYMHHDLNPPIAHSELSSDAILLTDDFAAKIAEVVFCKNVVSPTKTTEGESKQFELPPECCPENDVYRFGVLLLEIITGKLPYQDHGNLTVLADWSAKYLREKTSDRSIVDPTLQSFKDEELSVIFDVIHECTQSDASVRPTMKDVTLKLRDALKISPDQAVPRLSPLWWAELEILSMEGT* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4558 578 PANTHER LRR RECEPTOR-LIKE KINASE 1 85 - -
Ahy13g4558 578 PANTHER LRR RECEPTOR-LIKE KINASE 105 578 - -
Ahy13g4558 578 MobiDBLite consensus disorder prediction 180 196 - -
Ahy13g4558 578 PANTHER PROTEIN MALE DISCOVERER 2 1 85 - -
Ahy13g4558 578 ProSiteProfiles Protein kinase domain profile. 170 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g4558 578 Gene3D Phosphorylase Kinase; domain 1 257 363 - -
Ahy13g4558 578 SUPERFAMILY Protein kinase-like (PK-like) 268 544 IPR011009 -
Ahy13g4558 578 MobiDBLite consensus disorder prediction 180 214 - -
Ahy13g4558 578 Gene3D Transferase(Phosphotransferase) domain 1 365 559 - -
Ahy13g4558 578 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Ahy13g4558 578 PANTHER PROTEIN MALE DISCOVERER 2 105 578 - -
Ahy13g4558 578 Pfam Protein tyrosine and serine/threonine kinase 294 546 IPR001245 GO:0004672|GO:0006468
Ahy13g4558 578 Pfam Leucine rich repeat N-terminal domain 33 69 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4558 Ahy-Chr13 145956081 145961246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g4558 275 560 Receptor kinase-like Gene Family AT5G65700 29.373 1.53e-36 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Ahy13g4558 PK_Tyr_Ser-Thr 8.80E-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4558 - - adu:107482237 1083.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4558 13 145956081 145961246 Ahy3g4307 3 143102494 143106964 hybridization