Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4542 ATGGCTTCTCCGATTAGCGGAGGCTATTCTGGCTCTGGCTCTGAGGGAGATCCCCAGCAGCATACAATGGATCAAAGGAAGAGGAAGAGAATGCAGTCGAATCGGGAATCGGCGCGGAGATCGAGGATGAGGAAGCAGCAGCATCTTGATAGCCTGATTTCCCAGACTGATGAGCTGAAGAAGGAGAACAGCCAGATCAGCACAAGCATAGGGATCACCACAGAGCTTTATCTCAACATAGAATCTGAGAATGCAATCTTGAGGGCTCAGATGGCTGAACTTTCCAACAGGTTGCATTCTCTCAATGATATCATCAGTTACATCAACTCTGTGTCTAGCAGCACCGGCAACCACCACTTTCTTCATGCTCATGAGGCTCAGGAGACTCTTTTCAATGATTGTGGCTTCATGGACCCTTTCCACTCTCTGGCTGCTAATCAACCAATCATGGACATGCTCATGTATTGA 468 0.4808 MASPISGGYSGSGSEGDPQQHTMDQRKRKRMQSNRESARRSRMRKQQHLDSLISQTDELKKENSQISTSIGITTELYLNIESENAILRAQMAELSNRLHSLNDIISYINSVSSSTGNHHFLHAHEAQETLFNDCGFMDPFHSLAANQPIMDMLMY* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4542 155 PANTHER BZIP TRANSCRIPTION FACTOR BZIP124 9 154 - -
Ahy13g4542 155 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 24 70 IPR004827 GO:0003700|GO:0006355
Ahy13g4542 155 SUPERFAMILY Leucine zipper domain 26 79 IPR046347 GO:0003700|GO:0006355
Ahy13g4542 155 Pfam bZIP transcription factor 26 84 IPR004827 GO:0003700|GO:0006355
Ahy13g4542 155 PANTHER BZIP TRANSCRIPTION FACTOR 44 9 154 - -
Ahy13g4542 155 MobiDBLite consensus disorder prediction 1 65 - -
Ahy13g4542 155 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 29 44 IPR004827 GO:0003700|GO:0006355
Ahy13g4542 155 SMART brlzneu 22 86 IPR004827 GO:0003700|GO:0006355
Ahy13g4542 155 MobiDBLite consensus disorder prediction 1 19 - -
Ahy13g4542 155 MobiDBLite consensus disorder prediction 48 65 - -
Ahy13g4542 155 MobiDBLite consensus disorder prediction 20 47 - -
Ahy13g4542 155 Gene3D - 24 78 - -
Ahy13g4542 155 Coils Coil 77 104 - -
Ahy13g4542 155 CDD bZIP_plant_GBF1 27 77 IPR045314 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4542 Ahy-Chr13 145778969 145780346 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g4542 19 155 bZIP Transcription Factor Family AT4G34590 49.645 3.79e-35 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Ahy13g4542 bZIP_1 6.50E-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4542 K25786 - gmx:778139 166.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4542 13 145778969 145780346 Ahy3g4290 3 142920611 142921967 hybridization