Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4541 ATGGCAACTTTAGTTGAGCCTCCTAACAAAATTAAGCCAAAGGGAAAGCATTATTATACAATATGGCAAACATTGTTCGAGATTGATACCAAGTACATTCCAATCAAGCCGATTGGTCGAGGTGCATATGGCGTGGTTTGCTCTTCCATCAACAGGGAGACTAATGAGAAGGTGGCAATCAAGAAGATTGGCAATATCTTTGATAACTGTATTGATGCGCTGAGGACTTTGAGAGAGGTGAAGCTGCTAAGGCATATCCGGCACGAGAATGTCATTGCTTTGAAGGATGTGATGATGCCAATCCAGAGGACGAGCTTTAAGGATGTTTACTTGGTCTATGAACTCATGGATACAGATCTTCACCAAATTATTAAGTCTTCGCAGCCACTCTCCAATGATCATTGCAAATATTTCTTGTTTCAGCTGCTTCGAGGTCTCAAATACCTTCATTCTGCGAATATTCTGCACCGGGACTTGAAACCTGGAAATCTGCTGGTTAATGCCAATTGTGATTTGAAGATATGTGATTTTGGCCTTGCGCGAACCAATGGAGCTGAGGGCCAGTTCATGACAGAGTATGTTGTCACCCGCTGGTATCGAGCTCCAGAGCTCCTGCTTTGCTGCGAAAACTATGGAACCTCTATTGATGTATGGTCAGTGGGATGCATTTTTGCTGAGATTCTTGGAAGAAAGCCAATCTTCCCAGGAAGTGAGTGCCTCAACCAGCTGAAACTGATCATAAGTGTACTTGGAAGCCAGCAAGAGTCTGATCTTGCATTTATTGATAACCCCAAGGCCAGGAGGTTTATCAGATCACTGCCATATACAAGGGGTAGACCCTTTGCTCAACTATTTCCACAAGCCGACCCATTAGCAATTGATTTGTTGCAAAAGATGCTAGTATTTGATCCAACTAAGAGAATTACTGTCTTAGAAGCACTCCAGCATCCGTATATGGCTGGACTCTATGATCCAAGACTTAACCCTCCTGCTCAAGTTCCAGTCAATCTTGACATAGACGAAAACTGGGGCGAAGAGATGATTAGAGAAATGATGTGGAATGAGATGCTTCAGTATCATCCTGAAGCTGCTTCTGCCAATGTTTGA 1107 0.4327 MATLVEPPNKIKPKGKHYYTIWQTLFEIDTKYIPIKPIGRGAYGVVCSSINRETNEKVAIKKIGNIFDNCIDALRTLREVKLLRHIRHENVIALKDVMMPIQRTSFKDVYLVYELMDTDLHQIIKSSQPLSNDHCKYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTNGAEGQFMTEYVVTRWYRAPELLLCCENYGTSIDVWSVGCIFAEILGRKPIFPGSECLNQLKLIISVLGSQQESDLAFIDNPKARRFIRSLPYTRGRPFAQLFPQADPLAIDLLQKMLVFDPTKRITVLEALQHPYMAGLYDPRLNPPAQVPVNLDIDENWGEEMIREMMWNEMLQYHPEAASANV* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4541 368 Pfam Protein kinase domain 35 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g4541 368 SMART serkin_6 32 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g4541 368 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11 365 - -
Ahy13g4541 368 CDD STKc_TEY_MAPK 26 361 - -
Ahy13g4541 368 ProSitePatterns Protein kinases ATP-binding region signature. 38 62 IPR017441 GO:0005524
Ahy13g4541 368 Gene3D Transferase(Phosphotransferase) domain 1 116 345 - -
Ahy13g4541 368 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11 365 - -
Ahy13g4541 368 ProSiteProfiles Protein kinase domain profile. 32 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g4541 368 Gene3D Phosphorylase Kinase; domain 1 19 355 - -
Ahy13g4541 368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
Ahy13g4541 368 SUPERFAMILY Protein kinase-like (PK-like) 24 326 IPR011009 -
Ahy13g4541 368 ProSitePatterns MAP kinase signature. 67 170 IPR003527 GO:0004707|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4541 Ahy-Chr13 145771035 145774277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g4541 1 368 MAP Kinase Gene Family AT2G18170 83.424 0.0 655
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Ahy13g4541 Pkinase 2.40E-69 CL0016