Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4526 ATGGGAACTTGCTGGGGTTCTCCAAAATTACCACCCCATAACTCCAACCCAACTACCACCACCACCACCACCACCGGTAACCTCAGCGGAGGTACGGCATCAACGTCAACGTCAACGTCAACGTCAACGTTAACGTTAACCTCAACGGGGACATCCCGCGTCACGAGCAGCAGCTGCAGCTACACGACTTCGTCGGGAAGTGGGAACATCAGCTCCGTAAGCAAGTTCTCCGATGATCATTATCCCGACGGCCAGATCCTACCTGCCGCAAATCTCAGGATCTTCACCTTCGCAGAGTTGAAGGCTGCCACTAGGAATTTCAGACTTGACACCGTGCTTGGCGAGGGAGGTTTCGGCAAGGTCTACAAGGGGTGGCTCGAAGACAAGCCATCCTCCAAGAATGCAAATGGAACCGTCATTGCCGTCAAAAAATTGAACTCCGAAAGCTTACAGGGGCTTGAGGAGTGGAAGTCAGAAGTAAATTTTCTGGGACGCCTCTCTCATCCTAACCTTGTTAAGTTGTTGGGATACTGCTTGGAGGAAGCAGAACTTCTTCTCATCTATGAATTTATGCAGAAAGGCAGTTTGGAAAACCACCTATTCGGAAGGGGCTCTGCTGTTCAACCACTTCCATGGGATATTAGGCTTAAGATTGCAATCGGAGCAGCTCGTGGCCTGGCCTTCTTGCATACATCCGAGAAAGTAATTTACAGAGACTTCAAGGCCTCCAATATATTGCTCGATGGGGCCTATAATGCAAAGATATCAGACTTTGGCTTGGCAAAACTGGGTCCTTCAGCTAGTCGCTCCCATGTGACAACTAGGGTGATGGGCACATATGGTTATGCAGCTCCTGAATATGTTGCTACAGGGCATCTGTATGTGAAGAGTGACGTGTATGCATTTGGAGTAGTTTTGGTGGAGATGCTAACAGGGCTACGAGCACTTGACCCAAACCGCCCAAGTGGGCAACATAATCTAACAGATTGGATCAAACCATACCTGCATGATAGAAGAAAGCTGAAAAGCATTATGGATTTTCGGTTGGAAGGAAAATATCCATCCAAAGTTGCATTTCGTATAGCTCAGCTTGCGCTGAGATGTCTTGAAACTGAGCCCAAACAGCGGCCGTCAATGAAGGAAGTTTTGGAGAGCTTGGAGCGATTTCATGCTGCCAATGAGAAACCTATGGAGCCAAAATCTGGTTCTAATCATACTCATAGCCGTCGAGGTCAGCAAGCTGTGCACCATCGTTCTCCACTCCATCCATAG 1272 0.4851 MGTCWGSPKLPPHNSNPTTTTTTTTGNLSGGTASTSTSTSTSTLTLTSTGTSRVTSSSCSYTTSSGSGNISSVSKFSDDHYPDGQILPAANLRIFTFAELKAATRNFRLDTVLGEGGFGKVYKGWLEDKPSSKNANGTVIAVKKLNSESLQGLEEWKSEVNFLGRLSHPNLVKLLGYCLEEAELLLIYEFMQKGSLENHLFGRGSAVQPLPWDIRLKIAIGAARGLAFLHTSEKVIYRDFKASNILLDGAYNAKISDFGLAKLGPSASRSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYAFGVVLVEMLTGLRALDPNRPSGQHNLTDWIKPYLHDRRKLKSIMDFRLEGKYPSKVAFRIAQLALRCLETEPKQRPSMKEVLESLERFHAANEKPMEPKSGSNHTHSRRGQQAVHHRSPLHP* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4526 423 PANTHER SERINE/THREONINE-PROTEIN KINASE PIX13-RELATED 39 403 - -
Ahy13g4526 423 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
Ahy13g4526 423 SUPERFAMILY Protein kinase-like (PK-like) 84 386 IPR011009 -
Ahy13g4526 423 MobiDBLite consensus disorder prediction 9 69 - -
Ahy13g4526 423 CDD STKc_IRAK 113 389 - -
Ahy13g4526 423 MobiDBLite consensus disorder prediction 376 423 - -
Ahy13g4526 423 Pfam Protein tyrosine and serine/threonine kinase 109 386 IPR001245 GO:0004672|GO:0006468
Ahy13g4526 423 MobiDBLite consensus disorder prediction 376 405 - -
Ahy13g4526 423 PANTHER OS01G0588500 PROTEIN-RELATED 39 403 - -
Ahy13g4526 423 MobiDBLite consensus disorder prediction 1 69 - -
Ahy13g4526 423 Gene3D Phosphorylase Kinase; domain 1 91 190 - -
Ahy13g4526 423 Gene3D Transferase(Phosphotransferase) domain 1 191 413 - -
Ahy13g4526 423 ProSiteProfiles Protein kinase domain profile. 107 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g4526 423 ProSitePatterns Protein kinases ATP-binding region signature. 113 144 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4526 Ahy-Chr13 145561597 145564238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g4526 90 414 Receptor kinase-like Gene Family AT4G02010 48.632 8.75e-100 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Ahy13g4526 PK_Tyr_Ser-Thr 9.10E-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4526 - - gmx:100305417 622.468