Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4516 ATGCCTTCAGGTTTGGGAATGTTGTCTAATTTATCTGTGCTTGATCTCTCAGGAAATGAACTTTCTGGGTCTATTCCTGATTCATTGTTTTCACTTGGTAACCTCACAAGTCTTAATCTTTCTTCCAATTACTTATCTGGGAATGTTCCGAATCAACTTAGTAACCTTTCAGGGCTTGAAACTTTGGACCTTTCCAACAATGCACTAACTGGTAATGTGCCTAGTGTCTTGTTTTCTCGCCTTTCGAAACTTCGAGTTCTCAATTTGAGTGGTAACTTTATTGATGGTGATCTTCCTGATACTTTGTGGTCATTACCGAGCTTGCGTTTCGTTGATGTGTCCAACAACAACCTTACCGGTCCTCTACCGAAGTTTTTCGGTTCAAATACTAGTTCTACTGATGCCACCTTCAATCTCTCAAACAACTTATTCTTTGGAACTCTAAATATTTCGGCTAAGAAGTTTAGAATGATTGATCTGTCTGGTAATTATTTGGAAGGCGAGGTGCAAGGTGTTAGTCTTAGTAATGTTAGTTTAGCTAGGAATTGCCTGGAGGATGTTCCAAATCAGAGGGATGTTAGTGTTTGTAGAGTGTTTTATGAGAAGAGAAATTTACCCTTTCCATCAAATTCGACAATGGAAAAATCTTCCAGAAAGAAACTGATATTCATACTGGTAGGTGTATTTGGTGGACTTGGCTTTATTTTGCTTCTGGCATTGGTCCTCATACTGTTCTTAAAACTATGTGGCAATCATAAAAGCTTGGAAGTTCAAAGGGGAACCGAAAGTGGAGGGCCTGTTCCAGTAGGGGAGAGTCCTATGCCGCCTAAAGACCTTGCATTCGACATTGCTGTTGGGGAATCATTTACTTATGAGCAAATTCTCAAGTTGACTGGTAATTTTGCTGAAGAAAATGTCATCAAGCATGGTCATTCTGGAGACCTCTTCTGGGGAGTAATGGAAAATGGAGCTACTGTTGTCATCAAAAAGGTAGATTTGAGTTTGTTCAAGAGAGAATCATATGTTGTGGAGTTGGAATTATTAAGCAAGGTTTCACATGCAAGATTGATCCCAATCTTGGGACATTGCTTGGAGAATGACAATGAGAAATGTATAGTTTACAAGTATATGCCAAATGGAGATTTGGCAAGTTCTTTGCAGAGAGTCACCGATGCAGATGGTAAATCGAAGTCCCTTGATTGGATCACGAGATTGAAAATCGCTACAGGAGCTGCCGAAGGCCTTGCTTATCTACATGATTGCAGCCCTCCCCTCGCTCACAGAGATGTTCAAGCTAGCAGCATACTTCTTGATGATAAATTTGAGGTGCGACTTGGAAGTTTGAGTGAGGTTACCACCCAAGGAGATGTCCATCCTGGTGTCATGAACAGGCTGTTCAGCAAGCCATCATCTTCTAATCAACCAAATTTTGGCACATCATCAGTAACTTGGGCAGGTGATGTATATGGTTTTGGTAAGATTTTGCTCGAGCTTATTACCGGAGATACCGAGGTCAGTAAATCGGAGGATGCCACCTCAAGAGAGTGGTTGGAGCAGACCTTGCCTTACATTAGCATAGATGATAAAGAAAGGATAAATAAGATTGTCGACCCTTCTTTGTTAGAAAATGAGGATCTACTTGAAGAAGTATGGGCTATAGCAATCGTAGCAAGATCATGCCTGAATCCTAGGCCTTCGAAACGTCCCCCTATGAGACACGTCCTCAGGGCGCTGGAAAATCCGTTGAAGGTTGTAAGAGAAGAAAGCGCAAGCTCGGTGAAGTTGCGAACAACTTCGTCTAGGAAGTCTTGGAGCACTGGATTGTTTGGTAGCTGGAGACAGAGCTCATCAGATAGTGCTACTGCAACAAACAAAGATAGTTCAAGTGGGACTAAACAATCAGGGAAAGTAAGTTCCCAAGGAAGTGGTGTAATAATGGATCACTCATCTTCCAATAAAAGATCATCCAAATCCAATGAAGTTTTCCCTGAACCATTGGAAACACAAGATGTGGAGATTGGTGGGGGAAGATGA 2034 0.4159 MPSGLGMLSNLSVLDLSGNELSGSIPDSLFSLGNLTSLNLSSNYLSGNVPNQLSNLSGLETLDLSNNALTGNVPSVLFSRLSKLRVLNLSGNFIDGDLPDTLWSLPSLRFVDVSNNNLTGPLPKFFGSNTSSTDATFNLSNNLFFGTLNISAKKFRMIDLSGNYLEGEVQGVSLSNVSLARNCLEDVPNQRDVSVCRVFYEKRNLPFPSNSTMEKSSRKKLIFILVGVFGGLGFILLLALVLILFLKLCGNHKSLEVQRGTESGGPVPVGESPMPPKDLAFDIAVGESFTYEQILKLTGNFAEENVIKHGHSGDLFWGVMENGATVVIKKVDLSLFKRESYVVELELLSKVSHARLIPILGHCLENDNEKCIVYKYMPNGDLASSLQRVTDADGKSKSLDWITRLKIATGAAEGLAYLHDCSPPLAHRDVQASSILLDDKFEVRLGSLSEVTTQGDVHPGVMNRLFSKPSSSNQPNFGTSSVTWAGDVYGFGKILLELITGDTEVSKSEDATSREWLEQTLPYISIDDKERINKIVDPSLLENEDLLEEVWAIAIVARSCLNPRPSKRPPMRHVLRALENPLKVVREESASSVKLRTTSSRKSWSTGLFGSWRQSSSDSATATNKDSSSGTKQSGKVSSQGSGVIMDHSSSNKRSSKSNEVFPEPLETQDVEIGGGR* 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4516 677 MobiDBLite consensus disorder prediction 604 677 - -
Ahy13g4516 677 ProSiteProfiles Protein kinase domain profile. 301 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g4516 677 Gene3D Ribonuclease Inhibitor 1 190 IPR032675 -
Ahy13g4516 677 SMART LRR_typ_2 56 80 IPR003591 -
Ahy13g4516 677 SMART LRR_typ_2 105 128 IPR003591 -
Ahy13g4516 677 SMART LRR_typ_2 81 104 IPR003591 -
Ahy13g4516 677 SMART LRR_typ_2 8 32 IPR003591 -
Ahy13g4516 677 PANTHER OS01G0253100 PROTEIN 8 661 IPR045271 GO:0004714|GO:0006468
Ahy13g4516 677 PRINTS Leucine-rich repeat signature 56 69 - -
Ahy13g4516 677 PRINTS Leucine-rich repeat signature 11 24 - -
Ahy13g4516 677 ProSiteProfiles Leucine-rich repeat profile. 10 32 IPR001611 GO:0005515
Ahy13g4516 677 Pfam Leucine rich repeat 58 118 IPR001611 GO:0005515
Ahy13g4516 677 PANTHER OS03G0724300 PROTEIN 8 661 - -
Ahy13g4516 677 Gene3D Transferase(Phosphotransferase) domain 1 377 601 - -
Ahy13g4516 677 SUPERFAMILY L domain-like 5 189 - -
Ahy13g4516 677 ProSiteProfiles cAMP/cGMP binding motif profile. 304 355 IPR000595 -
Ahy13g4516 677 Pfam Protein tyrosine and serine/threonine kinase 305 577 IPR001245 GO:0004672|GO:0006468
Ahy13g4516 677 Pfam Leucine Rich Repeat 10 31 IPR001611 GO:0005515
Ahy13g4516 677 Gene3D Phosphorylase Kinase; domain 1 279 376 - -
Ahy13g4516 677 SUPERFAMILY Protein kinase-like (PK-like) 283 578 IPR011009 -
Ahy13g4516 677 MobiDBLite consensus disorder prediction 604 663 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4516 Ahy-Chr13 145403526 145407634 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g4516 1 469 Miscellaneous Gene Families AT2G16250 44.465 5.37e-133 405
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Ahy13g4516 PK_Tyr_Ser-Thr 3.00E-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4516 - - aip:107635843 918.687