Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4500 ATGAAGTTGAAGAAGTTAAAGAGTTCCTCTGTTTTTTCAGCTACAGTTGTTTTTACCGTTATGTCCCTGTTCTTCTTCGTTGAGTTCAGTTCTGCTTTGAGTTCAAGCACTGAAAAGTTGAGTTCAAGAACCGAATGGTTATCGTTGCTTCAACTTCGATCTTCATTGGGTATAAGAGCAAAAAACTGGCCAAGAAAAACCGAACCGTGCCGGAACTGGACCGGGATTCATTGCAAAACGGGTTCAGTTATCGGAATCAACATTTCCGGTTTCAGAAGAACACATAAAGCTAGTCTTCACCCAAGTTTCTCAGTTGATGCACTTGCCAATTTTACCCGTTTAGCTTCCTTCAATGCTTCAGGTTTTGTGCTTAATGGTTCTATTCCTGAGTGGTTTGGTGACAAAAACAATAACAACTACCTTGGTGCACTCCAGGTGCTTGATTTAAGTTCTTGCTCAATAACTGGCTCTATTCCTGAGTCAATTGGTGGTTTGATTTTGTTGAAGTCTGTGTTACTTTCTGGGAATAGCTTAACTGGTAGAATGCCTTCAGGTTTGGGAATGTTGTCTAATTTGTCTGTGCTTGATCTCTCAGGAAATGAACTTTCTGGGTCTATTCCTGATTCATTGTTTTCACTTGGTAACCTCACAAGTCTTAATCTTTCTTCCAATTACTTATCTGGGAATGTTCCGAATCAACTTAGTAACCTTTCAGGGCTTGAAACTTTGGACCTTTCCAACAATGCACTAACTGGTAATGTGCCTAGTGTCTTGTTTTCTCGCCTTTCGAAACTTCGAGTTCTCAATTTGAGTGGTAACTTTATTGATGGTGATCTTCCTGATACTTTGTGGTCATTACCGAGCTTGCGTTTCGTTGATGTGTCCAACAACAACCTTACCGGTCCTCTACCGAAGTTTTTCGGTTCAAATACTAGTTCTACTGATGCCACATTCAATCTCTCAAACAACTTATTCTTTGGAACTCTAAATATTTCGGCTAAGAAGTTTAGAATGATTGATCTGTCCGGTAATTATTTGGAAGGCGAGGTGCAAGGTGTTAGTCTTAGTAATGTTGGTTTAGCTAGGAATTGTCTGGAGGATGTTCCAAATCAGAGGGATGTTAGTGTTTGTAGAGTGTTTTATGAGAAGAGAAATTTACCCTTTCCATCAAATTTGACAATGGAAAAATCTTCCAGAAAGAAACTGATATTCATACTGGTAGGTGTATTTGGTGGACTTGGCTTTATTTTGCTTCTGGCATTGGTCCTCGTACTGTTCTTAAAACTATGTGGCAATCATAAAAGCTTGGAAGTTCAAAGGGGAACCGAAAGTGGAGGGCCTGTTCCAGTAGGGGAGAGTCCTGTGCCGCCTAAAGACCTTGCATTCCACATTGCTGTCGGGGAATCATTTACTTATGAGCAAATTCTCAAGTTGACTGGTAATTTTGCTGAAGAAAATATCATCAAGCATGGTCATTCTGGAGACCTCTTCTGGGGAGTAATGGAAAACGGAGCTACTGTTGTCATCAAAAGGGTAGATTTGAGTTTGTTCAAGAGAGAATCATATGTTGTGGAGTTGGAATTATTAAGCAAGGTTTCACATGCAAGATTGATCCCAATCTTGGGACATTGCTTGGAGAATGACAATGAGAAATGTATAGTTTACAAGTATATGCCAAATGGAGATTTGGCAAGTTCTTTGCAGAGAGTCACCGATGCAGATGGTAAATCGAAGTCCCTTGATTGGATCACGAGATTGAAAATCGCTACAGGAGCTGCCGAAGGCCTTGCTTATCTACATGATTGCAGCCCTCCCCTCGCTCACAGAGATGTTCAAGCTAGCAGCATACTTCTTGATGATAAATTTGAGGTGCGACTTGGAAGTTTGAGTGAGGTTACCACCCAAGGAGATGTCCATCCTGGTGTCATGAACAGGCTGTTCAGCAAGCCATCATCTTCTAATCAACCAAATTTTGGCACATCATCAGTAACTTGGGCAGGTGATGTATATGGTTTTGGTAAGATTTTGCTCGAGCTTATTACTGGAGATACTGAGGTCAGTAAATTGGACGATGCCACCTCAAGAGAGTGGTTGGAGCAGACCTTGCCTTACATTAGCATAGATGATAAAGAAAGGATAAATAAGATTGTTGACCCTTCTTTGTTAGTAAATGAGGATCTACTTGAAGAAGTATGGGCTATAGCAATCGTGGCAAGATCATGCCTGAATCCTAGGCCTTCGAAACGTCCTCCTATGAGACATGTCCTCAGGGCGCTGGAAAATCCGTTGAAGGTTGTAAGAGAAGAAAGCGCAAGCTCGGTGAAGTTGCGAACAACTTCGTCTAGGAAGTCTTGGAGCACTGGATTGTTTGGTAGCTGGAGACAGAGCTCATCAGATAGTGCTACTGCAACAAACAAAGATAGTTCAAGTGGGACTAAACAATCAGGGAAAGTAAGTTCCCAAGGAAGTGGTGTAATAATGGATCACTCATCTTCCAATAAAAGATCATCCAAATCCAATGAAGTTTTCCCTGAACCATTGGAAACACAAGATGTGGAGATTGGTGGGGGAAGATGA 2577 0.4133 MKLKKLKSSSVFSATVVFTVMSLFFFVEFSSALSSSTEKLSSRTEWLSLLQLRSSLGIRAKNWPRKTEPCRNWTGIHCKTGSVIGINISGFRRTHKASLHPSFSVDALANFTRLASFNASGFVLNGSIPEWFGDKNNNNYLGALQVLDLSSCSITGSIPESIGGLILLKSVLLSGNSLTGRMPSGLGMLSNLSVLDLSGNELSGSIPDSLFSLGNLTSLNLSSNYLSGNVPNQLSNLSGLETLDLSNNALTGNVPSVLFSRLSKLRVLNLSGNFIDGDLPDTLWSLPSLRFVDVSNNNLTGPLPKFFGSNTSSTDATFNLSNNLFFGTLNISAKKFRMIDLSGNYLEGEVQGVSLSNVGLARNCLEDVPNQRDVSVCRVFYEKRNLPFPSNLTMEKSSRKKLIFILVGVFGGLGFILLLALVLVLFLKLCGNHKSLEVQRGTESGGPVPVGESPVPPKDLAFHIAVGESFTYEQILKLTGNFAEENIIKHGHSGDLFWGVMENGATVVIKRVDLSLFKRESYVVELELLSKVSHARLIPILGHCLENDNEKCIVYKYMPNGDLASSLQRVTDADGKSKSLDWITRLKIATGAAEGLAYLHDCSPPLAHRDVQASSILLDDKFEVRLGSLSEVTTQGDVHPGVMNRLFSKPSSSNQPNFGTSSVTWAGDVYGFGKILLELITGDTEVSKLDDATSREWLEQTLPYISIDDKERINKIVDPSLLVNEDLLEEVWAIAIVARSCLNPRPSKRPPMRHVLRALENPLKVVREESASSVKLRTTSSRKSWSTGLFGSWRQSSSDSATATNKDSSSGTKQSGKVSSQGSGVIMDHSSSNKRSSKSNEVFPEPLETQDVEIGGGR* 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4500 858 PRINTS Leucine-rich repeat signature 237 250 - -
Ahy13g4500 858 PRINTS Leucine-rich repeat signature 192 205 - -
Ahy13g4500 858 MobiDBLite consensus disorder prediction 785 858 - -
Ahy13g4500 858 Pfam Leucine rich repeat 239 299 IPR001611 GO:0005515
Ahy13g4500 858 SUPERFAMILY Protein kinase-like (PK-like) 462 759 IPR011009 -
Ahy13g4500 858 ProSiteProfiles cAMP/cGMP binding motif profile. 485 536 IPR000595 -
Ahy13g4500 858 PANTHER RECEPTOR-LIKE PROTEIN 55 20 801 - -
Ahy13g4500 858 MobiDBLite consensus disorder prediction 785 844 - -
Ahy13g4500 858 PANTHER BNAA07G03560D PROTEIN 20 801 - -
Ahy13g4500 858 Gene3D Ribonuclease Inhibitor 42 205 IPR032675 -
Ahy13g4500 858 Gene3D Ribonuclease Inhibitor 257 371 IPR032675 -
Ahy13g4500 858 Pfam Leucine rich repeat N-terminal domain 47 78 IPR013210 -
Ahy13g4500 858 Pfam Protein tyrosine and serine/threonine kinase 487 758 IPR001245 GO:0004672|GO:0006468
Ahy13g4500 858 ProSiteProfiles Protein kinase domain profile. 482 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g4500 858 Gene3D Transferase(Phosphotransferase) domain 1 558 782 - -
Ahy13g4500 858 SUPERFAMILY L domain-like 63 347 - -
Ahy13g4500 858 ProSiteProfiles Leucine-rich repeat profile. 191 213 IPR001611 GO:0005515
Ahy13g4500 858 Pfam Leucine Rich Repeat 144 165 IPR001611 GO:0005515
Ahy13g4500 858 Pfam Leucine Rich Repeat 191 212 IPR001611 GO:0005515
Ahy13g4500 858 Gene3D Phosphorylase Kinase; domain 1 459 557 - -
Ahy13g4500 858 Gene3D Ribonuclease Inhibitor 206 256 IPR032675 -
Ahy13g4500 858 SMART LRR_typ_2 237 261 IPR003591 -
Ahy13g4500 858 SMART LRR_typ_2 262 285 IPR003591 -
Ahy13g4500 858 SMART LRR_typ_2 286 309 IPR003591 -
Ahy13g4500 858 SMART LRR_typ_2 141 165 IPR003591 -
Ahy13g4500 858 SMART LRR_typ_2 189 213 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4500 Ahy-Chr13 145210048 145214830 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g4500 44 650 Miscellaneous Gene Families AT2G16250 47.094 0.0 550
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Ahy13g4500 PK_Tyr_Ser-Thr 2.60E-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4500 - - aip:107635843 1225.69