Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4486 ATGAAACTGAAGAGTGGTTGGGTGAGGAGGGCTTTTTATTCATGGATTCTAGTTTGTACGTTGGGAGGTTTGTACGGGTTCTGGCGCATGAGCATACATGCTTGTGAGCAGAGGAAAGAAAGTCTAATAAGCATGTGTGATGAAAGAGCAAGGATGCTGCAGGATCAGTTCAATGTGAGCATGAACCATATACAAGCCATGTCCATTTTGATAAAAACCTTCCACCATAACATGAACCCCTCGGCCATTGATCAGAGCACTTTTGCTAGATACACTGAAAGAACCTCGTTTGAGAGGCCCCTCACAAGTGGTGTTGCATACGCTGTAAGAGTGCTCCATTCTCAAAGGGAACAGTTTGAGAAGCAACAAGGATGGACTATTAAGAAGATGGATACTTTGCAACCATCCCTTGTTCAAGAAGAATATGCTCCTGTCATCTTTGCACAAGATACAATTGCACATGTCATTTCTCTTGACGTGCTATCTGGAAAGGAAGACCGTGAGAATGTGCTCCGAGCAAGGGAGTCAGGCAAAGGAGTTTTAACTGCACCCTTTCGGCTTCTCAAAACGAATCGCCTTGGGGTAATCCTCACATTTGCTGTCTACAAGAGAAATCTTCCATCCAATTCAACCCTTGATCAGAGGATTCAAGCAACTGATGGATATCTTGGTGGAGTCTTTGATGTTGAGTCGTTAGTGGAGAAACTACTGCAACAACTTGCTAGTGAGAAAGCTGTAGTTGTTAATGTGTATGATACTACCAATAATACACATCCCATTGTCATGTACGGTTCAAATGTATCAAGGGACTCTTTCTCTCATGTCAGCACTCTTAACTTTGGAGACCCTCTCAGGAAGCATGAGATGCACTGCAGGTTCAAACAAAAACTGCCATGGCCATGGTTGGCATTTAATACTTCTGTAGGAGGCTTTATTATTTGTGTCCTTCTTGGGTATATTTTCTATGCCACCTGCAATCGAGTTGTAAAAGCGGAAGAGGATCGGGATGAGATGACTGAGCTTAAAAAGCGAGCTGAGGCGGCTGATATTGCAAAATCCCAGTTTCTTGCTACTGTGTCCCACGAGATTAGAACACCAATGAATGGGGTTTTAGGGATGTTGCATATGCTTATGGACACGGATCTAGACGTAACCCAACAGGAGTATGTGAGAACGGCGCAGGGAAGTGGAAAAGCTTTGGTGTCACTTATAAACGAGGTATTGGATCAGGCAAAGATTGAAGCTGGTAAGCTGGAGCTTGAAGCTTCGCTGTTTGACTTGCGTGCTGTTTTGGATGATATATTATCATTATTTTCAGAAAAGTCTCAAGGAAAAGGAATAGAGTTGGCAGCTTATGTATCAGATGAGGTTCCTGAGCTGTTAATAGGTGATGCAGGAAGGTTTAGGCAAATAATTACCAATCTCATGGGTAATTCAATTAAGTTCACAGAGAAAGGGCATATTTATGTGACTGTCCATCTTGTTGAGGAGGTGGTCCATTCGATACAGATTGATAAAGAATTAGGCATGGAAAATGTAAATACCCTGAGTCTGAGTGGTTTCCCTGTTGCCGATAGTCGAAAAAGCTGGGAAGGCTTCAAAGCATTCAGTCAAGTAGGGCCTCTTGGTTCTTTCTCATCCTCTGTTACTGATGTAATCAATTTGATTGTATCGGTTGAGGACACTGGCGAAGGAATCCCTCTGGAAGCGCAGTCTCGAATCTTCACTCCGTTCATGCAGGTTGGTCCTTCCGTTTCCCGGAGACATGGTGGAACAGGTATTGGCCTAAGCATTAGCAAGTGTTTGGTTGGTCTCATGAATGGCCAAATTGGATTTGTCAGCATACCTAAGATTGGATCCACCTTCACTTTCACTGCTCTCTTCACCAATTCAACTGATTGCAAAATTCAGCAACTCAACAACAACAGCAACCACTCTAATCCTCCATCTTCAGAATTTCAGGGAATGACCGCATTACTCATTGACCCTAGATCGGTTAGAGCCAAAGTGTGTAGATATCATATTCAGAGGCTCGGCATTCGTATCGAATTGGTTTCGGATTTAGCCCAAGGTTTGTCCACCATAACGGAAGGCAACCAGATTATCAATATGGTACTTATTGAGCAGGAAGTGTGGGATAGAGATTCAGCCATGTCATCTCGCTTTGTCGATGGCGCCAGTAGAGTAGTTCATCATGGCGTTCCTCCTAAGTTGTTCATTCTTGTTAATTCTAATGGTTGGACATCAGGTATTGGTAATCCCACTGTGATCGTAAAACCTCTGAGAGCAAGTATGCTTGCTGCCTCGCTGCAGCGAGCCATGGGTGTTACTTGCCGAAATGGGGAGCTTCCGGGTTTATCTGTTGGCCACCTTCTTGGCGGGAAGAAAATTCTAATTGTAGATGACAATGTTGTGAACCGCACCGTAGCAGCTGGTGCTTTGAAAAAGTATGGAGCAGATGTGGTGTGTGTTAGCAGCGGAAAAGAGGCCATCTCTAAACTAAAACCACCTCATGAGTTCGATGCGTGCTTCATGGATATTCAAATGCCAGAAATGGACGGTTTTGAAGCTACAAAGAAAATAAGGGAGATGGAACGTTGCGCCAAGAGAGAAGGTTTTGTAGATAACTTATCAAAATGGGATGTCCCTATTTTGGCCATGACTGCAGACGTGATCCAGGCCACCCATGAGGAGTGTGTAAGGTGTGGCATGGATGGATATGTTTCTAAACCGTTTGAAGCCGAACAGCTTTATCGAGAAGTCTCAAGGTTTTTCCACTCCTGA 2784 0.4393 MKLKSGWVRRAFYSWILVCTLGGLYGFWRMSIHACEQRKESLISMCDERARMLQDQFNVSMNHIQAMSILIKTFHHNMNPSAIDQSTFARYTERTSFERPLTSGVAYAVRVLHSQREQFEKQQGWTIKKMDTLQPSLVQEEYAPVIFAQDTIAHVISLDVLSGKEDRENVLRARESGKGVLTAPFRLLKTNRLGVILTFAVYKRNLPSNSTLDQRIQATDGYLGGVFDVESLVEKLLQQLASEKAVVVNVYDTTNNTHPIVMYGSNVSRDSFSHVSTLNFGDPLRKHEMHCRFKQKLPWPWLAFNTSVGGFIICVLLGYIFYATCNRVVKAEEDRDEMTELKKRAEAADIAKSQFLATVSHEIRTPMNGVLGMLHMLMDTDLDVTQQEYVRTAQGSGKALVSLINEVLDQAKIEAGKLELEASLFDLRAVLDDILSLFSEKSQGKGIELAAYVSDEVPELLIGDAGRFRQIITNLMGNSIKFTEKGHIYVTVHLVEEVVHSIQIDKELGMENVNTLSLSGFPVADSRKSWEGFKAFSQVGPLGSFSSSVTDVINLIVSVEDTGEGIPLEAQSRIFTPFMQVGPSVSRRHGGTGIGLSISKCLVGLMNGQIGFVSIPKIGSTFTFTALFTNSTDCKIQQLNNNSNHSNPPSSEFQGMTALLIDPRSVRAKVCRYHIQRLGIRIELVSDLAQGLSTITEGNQIINMVLIEQEVWDRDSAMSSRFVDGASRVVHHGVPPKLFILVNSNGWTSGIGNPTVIVKPLRASMLAASLQRAMGVTCRNGELPGLSVGHLLGGKKILIVDDNVVNRTVAAGALKKYGADVVCVSSGKEAISKLKPPHEFDACFMDIQMPEMDGFEATKKIREMERCAKREGFVDNLSKWDVPILAMTADVIQATHEECVRCGMDGYVSKPFEAEQLYREVSRFFHS* 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4486 927 Pfam His Kinase A (phospho-acceptor) domain 351 416 IPR003661 GO:0000155|GO:0007165
Ahy13g4486 927 Coils Coil 328 351 - -
Ahy13g4486 927 ProSiteProfiles Response regulatory domain profile. 796 925 IPR001789 GO:0000160
Ahy13g4486 927 CDD HisKA 351 412 IPR003661 GO:0000155|GO:0007165
Ahy13g4486 927 SMART CHASE_2 79 265 IPR006189 -
Ahy13g4486 927 SMART HisKA_10 351 416 IPR003661 GO:0000155|GO:0007165
Ahy13g4486 927 Pfam Response regulator receiver domain 797 920 IPR001789 GO:0000160
Ahy13g4486 927 CDD HATPase_EvgS-ArcB-TorS-like 468 628 - -
Ahy13g4486 927 Pfam CHASE domain 82 263 IPR006189 -
Ahy13g4486 927 CDD PRTases_typeI 751 824 IPR000836 -
Ahy13g4486 927 SUPERFAMILY CheY-like 793 924 IPR011006 -
Ahy13g4486 927 Gene3D CHASE domain 83 297 IPR042240 -
Ahy13g4486 927 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 405 625 IPR036890 -
Ahy13g4486 927 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 338 417 IPR036097 GO:0000155|GO:0007165
Ahy13g4486 927 CDD REC_hyHK_CKI1_RcsC-like 797 921 - -
Ahy13g4486 927 PRINTS Bacterial sensor protein C-terminal signature 555 569 IPR004358 GO:0016310|GO:0016772
Ahy13g4486 927 PRINTS Bacterial sensor protein C-terminal signature 590 608 IPR004358 GO:0016310|GO:0016772
Ahy13g4486 927 PRINTS Bacterial sensor protein C-terminal signature 573 583 IPR004358 GO:0016310|GO:0016772
Ahy13g4486 927 PANTHER HISTIDINE KINASE 3 2 926 - -
Ahy13g4486 927 Gene3D - 324 414 - -
Ahy13g4486 927 SMART HKATPase_4 463 630 IPR003594 -
Ahy13g4486 927 Gene3D - 30 82 - -
Ahy13g4486 927 Gene3D - 415 632 IPR036890 -
Ahy13g4486 927 Gene3D - 791 927 - -
Ahy13g4486 927 ProSiteProfiles Response regulatory domain profile. 657 774 IPR001789 GO:0000160
Ahy13g4486 927 ProSiteProfiles Histidine kinase domain profile. 358 630 IPR005467 -
Ahy13g4486 927 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 463 628 IPR003594 -
Ahy13g4486 927 ProSiteProfiles CHASE domain profile. 79 290 IPR006189 -
Ahy13g4486 927 PANTHER TWO-COMPONENT HISTIDINE KINASE 2 926 - -
Ahy13g4486 927 SUPERFAMILY CheY-like 652 775 IPR011006 -
Ahy13g4486 927 SMART REC_2 795 921 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4486 Ahy-Chr13 145098218 145102848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g4486 1 927 Miscellaneous Gene Families AT1G27320 65.521 0.0 1240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Ahy13g4486 CHASE 1.30E-37 CL0165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4486 K14489 - gmx:100776798 1399.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4486 13 145098218 145102848 Ahy3g4203 3 142024507 142029027 hybridization