Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4459 ATGAAAGAAAGAAAGATCTTCGTTTTGTCAATTAAATGTAGTTGCTATCGAATTGAGGCAAATCAAGCACGTCTTTACACTCTTTCGTTCATTGTGTTCTTTTTCCTCCTCCCCATACCGTCGCGCTATTTTTTTCCCCTTTTTTTTTGTGTTTCTTTTTCTCCCTCCTCCTTTTTTCTTCTTGTCATCGCGTTGATCTATCGGTTCGCTATTTCCCTTTCAATATATCAAATTCGTTATCGGCATGGCGGCTATCGTGACAACGAGTTTAGGGACCGTGAGTCGAATTTGGATGTTTCAAGGCGCGGTTTCGCGAATTCGAAGGAAGATTACGATCGGGTTAGGAATGGAGGCCGTGACGTTGTGAGGGGTGGGAGCAGGGATGCAAGAGATAGGATTAGGGTTAGGCAGAAGGATATTAGGGAGAGAGAAGCTTCCAATGGCGGTCACCGGTCATCTTCTAGTAGGAGTGATTCTGGCAGCAGCGGAGGTGGTGGTAGTGATGGTGGCGGGCTTGGGCCCCGACGGTGTGGCTTTTCTGCCAAGACCATGGATAGGGAGCCTGGTGAACTTTCCAGTGAGAGTGGGTCTGATGGTGCTATTGAACCAGAGTCAATGATGAAAGACAGCGAGGTTGCGAATGTTGAACATAATAGGACTCGATCCCCGCCCCCACCAGAGAAGAAAAGGAAGTTTTCACCGATTGTGTGGGATCAGGATGACAAGGAAGTGAGCGAGCCATCTAAAACTAAATCTAAGGTTTCCACTGCTCCAGTGACTGCTCTTCCACCTCCGCCTCCACTGCCAAAATCATTTGTGCGGTCACCTAATGTTCCATATGGTGGAGTTGAGATACATCCTGTTAAAAAGAGTGAAACTAAGGATGTTGAATTACCGGAAGCTACTAGGGCCACTATGCCTTCTCCAGGATCGCATTCCATGTCTCCAAAACAGGCTTGGCATAATGATCGTGAAGCTGAGCAACAAGAAGGTGAGGATTATGTTCCTAGTCATAATATATCATCTTCGAGATGGGCAGCTGTAGATAACTCTCCCGGTGATGAGGGTGAAATCATCGATGATGAAGAATTGCCTAGGAGGAAGAGGAGGCTGTCTCCTGAGTTATTGGATACAAAACTACGGAACAAACTATTAAGCCCAGTGGAAGCTAAAAAAGAAGGATTTGATGGTGGCAGAGCTAAATCATCTGAATCTGATGAACGAGGTAGCCATGGGAGAACGTCCAGTGGGGATGATCATCCCGGAACTGCGTCGGAGAAGGATGACTACATGGAGATTGATGCTCAAGGTGGAAAAAGTGATACTAGTATTAATCATTCTGAGACGGATTCTGAGGACGAGGATGATAGGAGGGAGACTCCAGAACCTCCAGCGCCACCACAAAGAATGGTCAACATGCTTCAGGGTTGTAGAAGTGTTGATGAGTTTGAGAGACTTAACAAGATAGATGAAGGAACTTACGGTGTTGTATATAGGGCCAGAGATAAGAAGACTGGAGAAATTGTAGCATTGAAGAAAGTCAAGATGGAGAAGGAAAGAGAAGGATTCCCACTGACTTCACTTAGGGAAATAAACATTCTTCTTTCTTTCCACCACCCATCCATAGTTGATGTTAAGGAAGTAGTGGTAGGGAGTAGCCTTGATAGTATTTTCATGGTTATGGAATACATGGAGCATGATCTTAAAGGTCTGATGGAAGCAATGAAGCAACCATTTAGCCAGAGTGAAGTAAAGTGCTTAATGATCCAGCTTTTAGAAGGTGTTAAGTATCTTCACGATAATTGGGTGCTTCATAGGGATTTAAAAACTTCTAACCTCCTTTTGAATAATAGAGGTGAACTAAAGATATGTGATTTTGGTTTGGCTCGACAGTATGGGAGTCCATTGAAACCATACACACATCTCGTGGTTACTCTTTGGTACAGGGCACCTGAACTTCTTCTAGGGTCAAAACAATATTCAACAGCCATTGACATGTGGTCTCTAGGTTGTATCATGGCGGAACTTTTGTCCAAAGAACCACTATTCAATGGGAAAACAGAATTTGATCAGCTTGATAAGATTTTTAAGATTCTTGGCACACCAAACGAAACAATTTGGCCTGGGTTTTCAAAATTACCTGGAGTCAAGGTCAATTTTGTTAAGCACCAGTATAACCTCCTGCGCAAAAAGTTTCCTGCCACTTCGTTCACTGGTTCCCCAGTCCTTTCTGATGCTGGATTTGATTTGTTGAACAAGCTTCTTACTTATGACCCTGAAAAGCGGATCACGGCTGAAGCTGCTCTCAATCATGAATGGTTCCATGAAGTTCCTCTTCCCAAGAGCAAAGAATTTATGCCAACCTTTCCTGCTCAACATGCTCAAGACAGGCGGATGCGGAGAGTATTAAAGAGTCCGGATCCTTTAGAGGAGCAGCGCCGTAAGGAGTTGCAGCAGGGTGAATCAGGCACAGGTGGAATTTTTGGCTAG 2490 0.4446 MKERKIFVLSIKCSCYRIEANQARLYTLSFIVFFFLLPIPSRYFFPLFFCVSFSPSSFFLLVIALIYRFAISLSIYQIRYRHGGYRDNEFRDRESNLDVSRRGFANSKEDYDRVRNGGRDVVRGGSRDARDRIRVRQKDIREREASNGGHRSSSSRSDSGSSGGGGSDGGGLGPRRCGFSAKTMDREPGELSSESGSDGAIEPESMMKDSEVANVEHNRTRSPPPPEKKRKFSPIVWDQDDKEVSEPSKTKSKVSTAPVTALPPPPPLPKSFVRSPNVPYGGVEIHPVKKSETKDVELPEATRATMPSPGSHSMSPKQAWHNDREAEQQEGEDYVPSHNISSSRWAAVDNSPGDEGEIIDDEELPRRKRRLSPELLDTKLRNKLLSPVEAKKEGFDGGRAKSSESDERGSHGRTSSGDDHPGTASEKDDYMEIDAQGGKSDTSINHSETDSEDEDDRRETPEPPAPPQRMVNMLQGCRSVDEFERLNKIDEGTYGVVYRARDKKTGEIVALKKVKMEKEREGFPLTSLREINILLSFHHPSIVDVKEVVVGSSLDSIFMVMEYMEHDLKGLMEAMKQPFSQSEVKCLMIQLLEGVKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGSKQYSTAIDMWSLGCIMAELLSKEPLFNGKTEFDQLDKIFKILGTPNETIWPGFSKLPGVKVNFVKHQYNLLRKKFPATSFTGSPVLSDAGFDLLNKLLTYDPEKRITAEAALNHEWFHEVPLPKSKEFMPTFPAQHAQDRRMRRVLKSPDPLEEQRRKELQQGESGTGGIFG* 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4459 829 PANTHER CELL DIVISION PROTEIN KINASE 321 829 - -
Ahy13g4459 829 Pfam Protein kinase domain 483 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g4459 829 Gene3D Transferase(Phosphotransferase) domain 1 566 807 - -
Ahy13g4459 829 MobiDBLite consensus disorder prediction 318 332 - -
Ahy13g4459 829 MobiDBLite consensus disorder prediction 334 348 - -
Ahy13g4459 829 CDD STKc_CDC2L1 477 774 IPR045267 GO:0004674|GO:0005524|GO:0006468
Ahy13g4459 829 MobiDBLite consensus disorder prediction 794 818 - -
Ahy13g4459 829 ProSiteProfiles Protein kinase domain profile. 483 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g4459 829 MobiDBLite consensus disorder prediction 445 463 - -
Ahy13g4459 829 SUPERFAMILY Protein kinase-like (PK-like) 475 780 IPR011009 -
Ahy13g4459 829 Gene3D Phosphorylase Kinase; domain 1 468 565 - -
Ahy13g4459 829 MobiDBLite consensus disorder prediction 360 377 - -
Ahy13g4459 829 MobiDBLite consensus disorder prediction 209 249 - -
Ahy13g4459 829 MobiDBLite consensus disorder prediction 791 829 - -
Ahy13g4459 829 MobiDBLite consensus disorder prediction 115 470 - -
Ahy13g4459 829 ProSitePatterns Serine/Threonine protein kinases active-site signature. 603 615 IPR008271 GO:0004672|GO:0006468
Ahy13g4459 829 MobiDBLite consensus disorder prediction 259 273 - -
Ahy13g4459 829 PANTHER CYCLIN-DEPENDENT KINASE G-2-LIKE 321 829 - -
Ahy13g4459 829 MobiDBLite consensus disorder prediction 115 149 - -
Ahy13g4459 829 SMART serkin_6 483 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g4459 829 MobiDBLite consensus disorder prediction 150 164 - -
Ahy13g4459 829 MobiDBLite consensus disorder prediction 384 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4459 Ahy-Chr13 144719903 144727489 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g4459 474 820 Core Cell Cycle Gene Families AT5G10270 45.067 3.61e-94 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Ahy13g4459 Pkinase 1.60E-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4459 K08818 - gmx:100792524 1155.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4459 13 144719903 144727489 Ahy3g4177 3 141720828 141724620 hybridization