Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4423 ATGTCAGGTGCTGCTAGGGCGGTTGGGGCGGTTGCTCTACACACTTCAATGTGCAGCTTCTCATCCTCCCATTCCCACAGACCATCAACAACTCCTTTCAATTCTCACCAATCTAACACAAACACTCATCTCACTAGCCTCCTCCAAACTCACCCACTTTACCCTCTAACCACTGCAAGGCTCTCCCTTCAATTCAAAGAGAAAATCCTCTGCCTTGAGATCATGGGCGTTGATGCTGGCAAAGCATTGTCCCAGAACCCTGCTCTAACCACAGCTTCAATGGAATCCATTCAATCCATTATCTCCTTCCTTCTTTCCAAAGACATCCAGCACAAGGACATTCCTAGGATCATTTCCATGTGCCCCAAGATTCTCACCTCTGACATTAATTCTCAGCTTGACCCAGTTTTTGATTTTCTCTCACACGACCTCAAAGTCCCGGATCATAGCTTTAGGAAGGTTATCAATAAGTGTCCATACTTGCTCACCGCCAGTGTTGTAGATCAGCTTAAGCCAACTTTGTTTTATCTTAGAAGATTTGGCTTGAAGGACTTGAAGGCCCTGGCTTATCAAGAACCTGTTCTGTTGGTGTCTAGTGTTGAGAAATCCTTAATCCCTAAGCTGAGGTATTTGGAGAGTTTAGGATTCTCTAAGGATGAGGTTAAGGATATGGTCTTGAGATGTCCATCATTGCTCACTTTCAACATTGAAGTTAATTTTCGGCCCAAGTTTGAGTATCTTGTTGGGGAAATGGGGAAGAAACTGAAGGAGCTGAAAGAATTTCCCCAGTACTTTTCTTTTAGTTTGGAGAACAGGATAAAGCCTAGGCACATGGAGGTGTTGCAAAGTGGTATCAATTTGCCTTTGTCACTGATGCTTAAGAGCACTGATCAAGAGTTTAGGGAGCTGATAGAGCAGGGGGTGGGTGACATTCACTGA 939 0.4441 MSGAARAVGAVALHTSMCSFSSSHSHRPSTTPFNSHQSNTNTHLTSLLQTHPLYPLTTARLSLQFKEKILCLEIMGVDAGKALSQNPALTTASMESIQSIISFLLSKDIQHKDIPRIISMCPKILTSDINSQLDPVFDFLSHDLKVPDHSFRKVINKCPYLLTASVVDQLKPTLFYLRRFGLKDLKALAYQEPVLLVSSVEKSLIPKLRYLESLGFSKDEVKDMVLRCPSLLTFNIEVNFRPKFEYLVGEMGKKLKELKEFPQYFSFSLENRIKPRHMEVLQSGINLPLSLMLKSTDQEFRELIEQGVGDIH* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4423 312 Pfam mTERF 152 300 IPR003690 GO:0003690|GO:0006355
Ahy13g4423 312 Pfam mTERF 72 184 IPR003690 GO:0003690|GO:0006355
Ahy13g4423 312 SMART mt_12 222 254 IPR003690 GO:0003690|GO:0006355
Ahy13g4423 312 SMART mt_12 186 217 IPR003690 GO:0003690|GO:0006355
Ahy13g4423 312 SMART mt_12 80 110 IPR003690 GO:0003690|GO:0006355
Ahy13g4423 312 SMART mt_12 255 288 IPR003690 GO:0003690|GO:0006355
Ahy13g4423 312 SMART mt_12 152 183 IPR003690 GO:0003690|GO:0006355
Ahy13g4423 312 SMART mt_12 115 147 IPR003690 GO:0003690|GO:0006355
Ahy13g4423 312 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 19 306 - -
Ahy13g4423 312 MobiDBLite consensus disorder prediction 21 40 - -
Ahy13g4423 312 Gene3D Transcription termination factor 3, mitochondrial 41 306 IPR038538 -
Ahy13g4423 312 PANTHER CGI-12 PROTEIN-RELATED 19 306 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4423 Ahy-Chr13 144269940 144271206 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Ahy13g4423 mTERF 1.90E-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4423 K15032 - gmx:100788221 397.127