Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4414 ATGGAGGAGGAGGATGAGATCCAACCACAGGCGTGTAAGTTCCCCAGGCTCGCTAATGGCAGGACCGACCCCACCAACAAAGCCAAGATAGGAGCAGCCTGGCACCATTCCTCCAGGATCATAAGGGTTTCTAGAGCTTCCGGCGGCAAAGATCGCCATAGCAAGGTAATGACCTCTAAGGGCCTGAGAGACAGAAGGGTCAGGCTCTCCGTCACCACCGCCATTCAGTTTTATGACCTCCAAGACCGATTGGGCTATGACCAGCCCAGCAAGGCCGTGGAGTGGCTCATCAAGTCTGCTCAAGACGCCATTGCCGAGCTTCCATCCTTGAACACCACCTTCCCTGAAACCCCGAAGCAACCGAGCGATGAGAAGAGGGGCGGTGCAGGCGCCGACGATGCGGACATAGACATAGAGGAGCAGCAGAAGCAGAAGCAGAACAGCCAGAATATGTCACTTTCGAAGTCGGCTTGCAGCAGCACCTCAGAGACGAGCAAGGGGTCCGGGTTGTCCCTGTCTCGGTCCGATATCCGCGTGAAAGCGAGGGAGAGGGCAAGGGAGAGAGCGGCCAAGGAGAAGAAGAAAGACAAGTGCAACAATAATCAGCATCAGAATAACCTTGTTCATCATCAGCAACAGCAACAGCATCAGCAGCAGCATCACAACATGAACCCAATTTCTCCTTCGTTTACTGAGCTACTCACAGGTGGCATCACCACTGCGGTTCCAACAACAACTAGTCCTACTTCTGATGAGCCTGCTGCTGCTCTCTTCCACAAAGCGGCAAGGCAACAACAACAGCAGCAGCAGCAGCAGCAATGGGGTTCAGCACCCATGGATTACTTCAACCAGGTTCTCGTAGGCCCCTCTTCATCTTCAAGAACCCATCAACACCAACACCAGATCCAACTGGGACATCATACCCTAGCTGAGGCCATATCCTTTAATAATGATCAGCAGCAGCAGCAGCAGCACCACTACTCCTTCATCCCTGATCAGTTCATGCCAGCTGTGGTTACATCCTCTCACTCTCATAACCATCATCACAGTGCTGGCGACACTGATTACAACCTCAACTTCACCATTTCTCCGGCTTCTGTATCTGCTTCTGCCTCTGGCCTTGCTGCTTACAACAACAATAGGGGGACCCTTCAGTCCAATTCTCCGTCACATTTCTTGCCTCACCTCCAGAGGTTCTCGCTGCCTATGGACGGATCCACTGTTCCTTTCTTCATTGGAGCTGCCGCACCCACCGCTGCTCCGCCTCCTCCCATCGACAACCACCAACACCATCAGTTCTCATCACCCGCATTTGATGGCCGCTTGCACCTCTACTACGGCGATGGAACCCGCCATTCCGACCACAAGGGCAAATCCAAGAACTCATGA 1389 0.5342 MEEEDEIQPQACKFPRLANGRTDPTNKAKIGAAWHHSSRIIRVSRASGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKSAQDAIAELPSLNTTFPETPKQPSDEKRGGAGADDADIDIEEQQKQKQNSQNMSLSKSACSSTSETSKGSGLSLSRSDIRVKARERARERAAKEKKKDKCNNNQHQNNLVHHQQQQQHQQQHHNMNPISPSFTELLTGGITTAVPTTTSPTSDEPAAALFHKAARQQQQQQQQQQWGSAPMDYFNQVLVGPSSSSRTHQHQHQIQLGHHTLAEAISFNNDQQQQQQHHYSFIPDQFMPAVVTSSHSHNHHHSAGDTDYNLNFTISPASVSASASGLAAYNNNRGTLQSNSPSHFLPHLQRFSLPMDGSTVPFFIGAAAPTAAPPPPIDNHQHHQFSSPAFDGRLHLYYGDGTRHSDHKGKSKNS* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4414 462 Pfam TCP family transcription factor 48 195 IPR017887 -
Ahy13g4414 462 MobiDBLite consensus disorder prediction 1 25 - -
Ahy13g4414 462 Coils Coil 186 206 - -
Ahy13g4414 462 MobiDBLite consensus disorder prediction 119 142 - -
Ahy13g4414 462 MobiDBLite consensus disorder prediction 176 200 - -
Ahy13g4414 462 MobiDBLite consensus disorder prediction 207 226 - -
Ahy13g4414 462 Coils Coil 131 151 - -
Ahy13g4414 462 ProSiteProfiles R domain profile. 175 193 IPR017888 -
Ahy13g4414 462 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 461 IPR005333 GO:0003700
Ahy13g4414 462 MobiDBLite consensus disorder prediction 143 172 - -
Ahy13g4414 462 MobiDBLite consensus disorder prediction 109 201 - -
Ahy13g4414 462 ProSiteProfiles TCP domain profile. 49 107 IPR017887 -
Ahy13g4414 462 PANTHER TRANSCRIPTION FACTOR TCP24 1 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4414 Ahy-Chr13 144072683 144079387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g4414 34 461 TCP Transcription Factor Family AT4G18390 41.176 1.35e-73 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Ahy13g4414 TCP 5.70E-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4414 - - lang:109362619 376.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4414 13 144072683 144079387 Ahy13g4414 13 144072683 144079387 ECH