Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4408 ATGAGGAGGAACTGCAACTTAGAACTACGGCTTTTCCCTTCTCCTGCCTCCGACCACCGCTCCATGGAAGAAGAAGAAAGTAGGAGTAGCCCGTTACAAGGACAGCAGACACCGCAATCACACCCACTCACCATATTCTACGATGGCAAGATTTCCGTTTGTGACGTCACTCAATCTCAGGCAAGATCCATCTTAATGCTTGCAAGAAAAGAATTGGAGGAAAGAGTGAGGACACCAACATCAACTGGGTCTTCAGTGGAGCCATGTTCACCAGCATTGCTTCAATCATCGTCACAGCAACAACAATATTATAATAATAATTTGCATAGCCCCGGGAGTAGTCTTTCCATGAAAAGATCGCTGCAGAGGTTTCTCCAAAAGAGAAAGAACCGCCTTCAGGAAGCATCCCCCTACCATCACTAG 423 0.4657 MRRNCNLELRLFPSPASDHRSMEEEESRSSPLQGQQTPQSHPLTIFYDGKISVCDVTQSQARSILMLARKELEERVRTPTSTGSSVEPCSPALLQSSSQQQQYYNNNLHSPGSSLSMKRSLQRFLQKRKNRLQEASPYHH* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4408 140 MobiDBLite consensus disorder prediction 78 99 - -
Ahy13g4408 140 ProSiteProfiles Tify domain profile. 36 70 IPR010399 -
Ahy13g4408 140 PANTHER - 1 140 - -
Ahy13g4408 140 MobiDBLite consensus disorder prediction 1 42 - -
Ahy13g4408 140 Pfam Jas motif 118 138 IPR018467 -
Ahy13g4408 140 MobiDBLite consensus disorder prediction 73 99 - -
Ahy13g4408 140 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 1 140 IPR040390 -
Ahy13g4408 140 MobiDBLite consensus disorder prediction 28 42 - -
Ahy13g4408 140 SMART tify_2 36 70 IPR010399 -
Ahy13g4408 140 Pfam tify domain 38 68 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4408 Ahy-Chr13 144015590 144016577 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g4408 1 139 Tify Gene Family AT1G30135 40.972 7.27e-23 85.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Ahy13g4408 tify 1.50E-11 No_clan