Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4388 ATGAAGTGGAGGTGTGCCCTTTTTGAGTGCTGCTTTGCGTGCACTACTTCTGATGGATCGACCGAGTTTGATATTAAGTCACAGTTACCAAACTTGGGTTATACTGCACTTGCCAGTGCCTGTCATCATTTTCATCCATCCAAGAATCTTGGAACTAGAGCATATCGCAAGGTGTATCATGGTATACTAGAAGATTTTCGTGAAGTTGCAATCCAACGCTTATCGGCAAGTGAATTCCAATTCATTGAAAAGCATGTAGAAGGCTGCAGAAGCAGAATCTTAAGTCTTTTGCCGCATAAAAATGTGGTGTCTGTGTATGGGTACAGTTCTAACGGGAAAGAATTCCTGCTAGCACATGAGTACGTTCCAAATGGTGCTCTTCATAATCATCTTCATGGCCAAGGATCAAAGCGTCTCACGTTGCCATGGGATACCCGATTGGATATTGCTATTGATGTTGCCAATGCATTGGCATATCTTCACTCTAATGGCATCCTCCACAGCCAGGTAACATCCCACAATATTCTTCTGGACGAAAACTTAGGTGCAAAAGTTAAGAACTGTCTTGGATCATGGCAACTTGCCAGAGGCCCTTCTGGTTTTGTTTCACATAAAGTCGATACAATCCATGGGAGAATTGGTTATCTGGATCCAGCATTACTACCCATGGTAGAATTTTGTCTTAACTTCAAGAATGACGTATATAGTTTTGGGGTGGTGTTGTGTGAGCTTTTATCATCCAAGCCCTCGTACAAGAAGAGCGAAAACTTGCTAAACATGGAGCTTGCTACTTTCATAATCAGTAGAATTGAAAACAATGCGCTGGAGGAGATATTGGATCCAAGCCTTGGGTTTGAATCAGACCCTGCTGTAAAGCAGATGCTAACTTCTGTGGCAGTGCTAGCATATCAGTGCTTGATTTATGATGTGTCTCTAAGGCCATCCATGGCACAGGTGCTTGAGGGTTTGAAGGGCATCAGAGAACAGAGAAGGGACTTAAATTTGACTGCAGATTTCAAGTTCGAAACTCTGACATTGGCGTTTTTCTGGGATTACATGAAGTCACAATTCCAAATCTTTTCTTATGATGTGCTTGCAAAAGCAACTAACCATTTTGAGAATTATGTTGGGAAAGGAGGCTTTGGGACTGTTTACTATGGGAAGCTCCCACAAGGATATGAGGTAGCAATCAAACGTTTCCATGAAAAGAAGGAGAAGACAAGAAAGCAATTCACGACAGAAGTTGAGATCCTAAGTCTGATGCGCCATCAGAATCTGGTCTCGCTGTATGGCCGCAGTTCTGATGACAGTGATGAACTCCTGTTAGTTTACGAGTATGTCTCCAACGGTTCTCTATCGACCTATCTCCATAGAAATTCTGGAAACAAACTACCATGGGCTACCAGATTAAATATTGCCATTGAGACTGCTTCTGCACTAGCCTATCTTCACCATTCTGGTATAATTCACCGCGATGTCAAACCCAGCAACATTCTCTTGGACAAGAATCTAAGTGCCAAAGTTGCAGATTTCGGCCTGGCGCGGTTTCTTCCACTTGGGGATCTTGATTTTGTTACTCATGTTTCTACTGCTCCAGTAGGAACCCCTGCTTATATAGATCCTGAGTACTTTGAATTCAATAAGGTGAGTGATAAAAGCGACGTATATAGCTATGGCATGGTTTTGTTTCAGCTCATATCATCCATGCCTTCCACTGTAAGTCAGGGGCCGCAGCTTTTTACTTTGGCTAACTTTGCAATGGGAAAGATCTTGAACAATGAGTTGGAAGAGCTTGTGGATCCAAGTCTTGGTTTCCACTCGGACAATAGTGTTATGGAAACTATAACTGCAGTGGCAGAGTTGGCATTTCAGTGTGTGCAGCATCCTAAAGAATTCAGGCCATCAATGAAGCAGGTCTTAGAGACTTTGGAGGGCATAAAGCAAGGCTCTTGGGGGTTCAACCAGATAACATAA 1974 0.4286 MKWRCALFECCFACTTSDGSTEFDIKSQLPNLGYTALASACHHFHPSKNLGTRAYRKVYHGILEDFREVAIQRLSASEFQFIEKHVEGCRSRILSLLPHKNVVSVYGYSSNGKEFLLAHEYVPNGALHNHLHGQGSKRLTLPWDTRLDIAIDVANALAYLHSNGILHSQVTSHNILLDENLGAKVKNCLGSWQLARGPSGFVSHKVDTIHGRIGYLDPALLPMVEFCLNFKNDVYSFGVVLCELLSSKPSYKKSENLLNMELATFIISRIENNALEEILDPSLGFESDPAVKQMLTSVAVLAYQCLIYDVSLRPSMAQVLEGLKGIREQRRDLNLTADFKFETLTLAFFWDYMKSQFQIFSYDVLAKATNHFENYVGKGGFGTVYYGKLPQGYEVAIKRFHEKKEKTRKQFTTEVEILSLMRHQNLVSLYGRSSDDSDELLLVYEYVSNGSLSTYLHRNSGNKLPWATRLNIAIETASALAYLHHSGIIHRDVKPSNILLDKNLSAKVADFGLARFLPLGDLDFVTHVSTAPVGTPAYIDPEYFEFNKVSDKSDVYSYGMVLFQLISSMPSTVSQGPQLFTLANFAMGKILNNELEELVDPSLGFHSDNSVMETITAVAELAFQCVQHPKEFRPSMKQVLETLEGIKQGSWGFNQIT* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4388 657 CDD STKc_IRAK 376 646 - -
Ahy13g4388 657 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 355 649 IPR044652 -
Ahy13g4388 657 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 24 331 IPR044652 -
Ahy13g4388 657 Pfam Protein kinase domain 45 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g4388 657 Gene3D Transferase(Phosphotransferase) domain 1 122 344 - -
Ahy13g4388 657 Gene3D Transferase(Phosphotransferase) domain 1 447 652 - -
Ahy13g4388 657 Gene3D Phosphorylase Kinase; domain 1 350 446 - -
Ahy13g4388 657 Gene3D Phosphorylase Kinase; domain 1 16 121 - -
Ahy13g4388 657 Pfam Protein tyrosine and serine/threonine kinase 372 643 IPR001245 GO:0004672|GO:0006468
Ahy13g4388 657 SUPERFAMILY Protein kinase-like (PK-like) 353 644 IPR011009 -
Ahy13g4388 657 SMART serkin_6 44 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g4388 657 SMART serkin_6 370 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g4388 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 488 500 IPR008271 GO:0004672|GO:0006468
Ahy13g4388 657 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 355 649 - -
Ahy13g4388 657 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 24 331 - -
Ahy13g4388 657 ProSitePatterns Protein kinases ATP-binding region signature. 376 398 IPR017441 GO:0005524
Ahy13g4388 657 SUPERFAMILY Protein kinase-like (PK-like) 24 327 IPR011009 -
Ahy13g4388 657 ProSiteProfiles Protein kinase domain profile. 44 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g4388 657 ProSiteProfiles Protein kinase domain profile. 370 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4388 Ahy-Chr13 143642340 143645349 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g4388 356 648 Receptor kinase-like Gene Family AT1G25390 51.839 3.14e-91 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Ahy13g4388 Pkinase 3.10E-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4388 - - aip:107634816 1324.3