Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4386 ATGGCGGTGCAAATACATGAAAACCTTGTTAGATCAATGTTCACTATATCTCTGTTATGCTTGGCCACTTTGGCAAAACTTTCAATCTCTCAAGAAAGTGAATATGCAGCGTGCTCCAAGGCTTACAGCTGCGGAGAAATAGCCAACATCTACTATCCTTTCTGGGGAGGGAGCAGGCCAAGCTATTGCGGCATCAGCCAGCAATTCAAGCTCAGCTGCCACGCTAATCGCAACACCTCCATTCAAATTGGCTCACAGACTTTTCATGTGCTGAATATCGATCAACCTGCTTGCAACATAACAATGGTTAGAACTGGGATTGCCTATGATCAATGCTCTTCTCATTTAACCAACACTTCCTTAGAGACAAGCATGTTTCGCTTCTCGCCAAACGTTAGGAACGTCTCAATCTTCTATGACTGCGCTGGCAACAACAGTGAAACAATACACTCTTTCCCTTGCAAGGATGATCCCAAAAAGCGAGCTTTTTATGGGGATTTGGGTGTGGCGGTGGCTCAGAACTGCCAAGGAGTTCATGTGGAAGTGCAGGCGATACAGGAAGTGAGAGCTAATGAGGATGGAATTGAAGGGTTGAATAGAGCCTTGAGTGCAGGGTTTGATGTGAATTATAGTTCACCTTTTGACATTCAAAGATGCATAGGATGCATGTCGACTAAAGGAATATGCGGATCCAAAGATGAGTTTCGGTTTACTTGCTATTGCCCTGATGGAACTAATCATGCTTTGGATTGTTCTCATCATCATAGTAAATTGAATTGGAAAAAGAAAGTTGCCATAGGAGTTGCTGCTGCTGTGCTTAGTGCAGTTATATTAGGCATTGCCTTTAGTCTCTATTACCGTAGATGGAAGAAGAATTTTCAAGATGTATCATTTGTACCATCTCACAGCATGTCTTCTTTTTTAGAAGACACTGAAAAGGGACATCAAAAATACTCTGGACTCCAATTCTTTGCCTATAGAGAACTTCAAGAGGCCACAAACAACTTTGATCCAGACAGAGAACTAGGAGATGGAGGCTTTGGGAAAGTATATTTTGGAAAACTTGGAGACGGCCGTTTTGTTGCTGTGAAAAAGATGTATGAGAACAATTACAGGACAGTAGAGCAATTCATGAATGAAGTTGAGATCTTAACAGGCTTGCGCCACCAAAATCTGGTATCACTGTATGGATGTAATTCCAGCCACAGCAGCGAATTAATGCTTGTGTACGAATATGTTTCGAACGGAACAGTTGCAGATCATCTCCACGGACAGAAAGCGAAATCTGGTGCTCTCTGTTGGGATACCAGAATGAAGATTGCTATAGACACAGCTAGTGCATTGGTATATCTTCATGCTTCAGACATCATCCACAGAGATGTTAAAACCAATAATATCCTTCTTGATGATCACTTTAGAGCCAAAGTAGCCGATTTTGGACTCTCAAGACTATTTCCAAACCACTTAACTCACATTTCCACAGCGCCACAAGGCACACCTGGTTATGTTGATCCGGAGTACCACGAGTACTACCAGCTGACGGATAGAAGCGATGTGTACAGTTTTGGAGTTGTGCTGATTGAACTAATATCTTCAATGCGTGCAGTTGACATAACAAGGCATAGGCATGAGATCAATTTGTCGAACATGGCCATGAAGAAGATTCAGAGTGGTGCGTTGCATGAGATTGTAGACAAAAGCCTTGGATTCGAATCGGATTTGAGGGTAAGGAAGATGATCAATGGTGTTGCAGAGTTGGCATTTCGGTGCTTGCAGAGTTCTAAGGATATGAGGCCTTCAATGGTACAAGTGTTGGATACTTTGAAGGATATACAAAGTGATGGGAAATATAAAAGCAAACCAGAGGTGATGGATATATCAAAACAAGAAGATAATGATGCAACCGTGCTTAAGAACGAACCACCTCCACCTTCACCTGATTCAAATGGAAGAGTATAG 1959 0.4227 MAVQIHENLVRSMFTISLLCLATLAKLSISQESEYAACSKAYSCGEIANIYYPFWGGSRPSYCGISQQFKLSCHANRNTSIQIGSQTFHVLNIDQPACNITMVRTGIAYDQCSSHLTNTSLETSMFRFSPNVRNVSIFYDCAGNNSETIHSFPCKDDPKKRAFYGDLGVAVAQNCQGVHVEVQAIQEVRANEDGIEGLNRALSAGFDVNYSSPFDIQRCIGCMSTKGICGSKDEFRFTCYCPDGTNHALDCSHHHSKLNWKKKVAIGVAAAVLSAVILGIAFSLYYRRWKKNFQDVSFVPSHSMSSFLEDTEKGHQKYSGLQFFAYRELQEATNNFDPDRELGDGGFGKVYFGKLGDGRFVAVKKMYENNYRTVEQFMNEVEILTGLRHQNLVSLYGCNSSHSSELMLVYEYVSNGTVADHLHGQKAKSGALCWDTRMKIAIDTASALVYLHASDIIHRDVKTNNILLDDHFRAKVADFGLSRLFPNHLTHISTAPQGTPGYVDPEYHEYYQLTDRSDVYSFGVVLIELISSMRAVDITRHRHEINLSNMAMKKIQSGALHEIVDKSLGFESDLRVRKMINGVAELAFRCLQSSKDMRPSMVQVLDTLKDIQSDGKYKSKPEVMDISKQEDNDATVLKNEPPPPSPDSNGRV* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4386 652 ProSitePatterns Serine/Threonine protein kinases active-site signature. 456 468 IPR008271 GO:0004672|GO:0006468
Ahy13g4386 652 ProSitePatterns Protein kinases ATP-binding region signature. 342 365 IPR017441 GO:0005524
Ahy13g4386 652 MobiDBLite consensus disorder prediction 615 652 - -
Ahy13g4386 652 SUPERFAMILY Protein kinase-like (PK-like) 318 608 IPR011009 -
Ahy13g4386 652 ProSiteProfiles Protein kinase domain profile. 336 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g4386 652 Gene3D Transferase(Phosphotransferase) domain 1 413 624 - -
Ahy13g4386 652 SMART serkin_6 336 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g4386 652 Pfam Wall-associated receptor kinase C-terminal 170 244 IPR032872 -
Ahy13g4386 652 Pfam Wall-associated receptor kinase galacturonan-binding 38 102 IPR025287 GO:0030247
Ahy13g4386 652 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.2 13 649 - -
Ahy13g4386 652 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 13 649 IPR044652 -
Ahy13g4386 652 MobiDBLite consensus disorder prediction 615 635 - -
Ahy13g4386 652 Gene3D Phosphorylase Kinase; domain 1 307 412 - -
Ahy13g4386 652 Pfam Protein kinase domain 339 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4386 Ahy-Chr13 143632644 143636168 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g4386 13 648 Receptor kinase-like Gene Family AT1G25390 42.308 2.67e-146 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Ahy13g4386 Pkinase 2.10E-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4386 - - gmx:100794703 801.586