Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4341 ATGGCTAACAGAGCTCAAATTCCTACAAAAAACTCAGCTCTTATTGCCATGATTGCAGATGAGGATACTGTTGTTGGATTTCTGTTGGCTGGAGTGGGAAACATTGACATCCGTAGAAAGACAAATTATCTCATTGTGGATTCAAAAACAACTGTCAAACAAATTGAGGATGCATTCAAAGAATTCACAACAAGGGAGGATATTGCAATTGTGCTGATTAGCCAATACGTTGCAAATATGATAAGGTTTCTGGTTGACAGTTATAATAAGCCTGTTCCTGCAATTCTGGAAATCCCTTCCAAAGACCATCCTTATGATCCTGCACATGATTCAGTTCTTTCCCGAGTAAAGTATCTCTTTTCTGCCGAATCGGTGGCATCTGGGAGACGCTAA 393 0.3995 MANRAQIPTKNSALIAMIADEDTVVGFLLAGVGNIDIRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVLISQYVANMIRFLVDSYNKPVPAILEIPSKDHPYDPAHDSVLSRVKYLFSAESVASGRR* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4341 130 TIGRFAM V_ATP_synt_F: V-type ATPase, F subunit 11 124 IPR005772 GO:0033180|GO:0046961|GO:1902600
Ahy13g4341 130 SUPERFAMILY AtpF-like 15 99 IPR036906 GO:0034220
Ahy13g4341 130 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT F 1 130 - -
Ahy13g4341 130 PIRSF V-ATP_synth_F 3 123 IPR005772 GO:0033180|GO:0046961|GO:1902600
Ahy13g4341 130 Pfam ATP synthase (F/14-kDa) subunit 15 116 IPR008218 GO:0034220|GO:0046961
Ahy13g4341 130 PANTHER V-TYPE PROTON ATPASE SUBUNIT F 1 130 - -
Ahy13g4341 130 Gene3D ATPase, V1 complex, subunit F 9 122 IPR036906 GO:0034220
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4341 Ahy-Chr13 143087013 143090225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g4341 1 126 Primary Pumps ATPases(2) AT4G02620 88.889 5.37e-83 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4341 K02151 - gmx:100305531 246.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4341 13 143087013 143090225 Ahy3g4062 3 140099850 140103109 hybridization