Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4334 ATGAGGAGGGTTTCAAGTGCTGTGATGATCCTCTTGTGGTTGTTTTCTTCCACCATGATCATAGGAAACTCATCATCATTGCACAGTGAAACCACTCTCAGAGTGCTTTTGGAAGTGAAGAAATCTTTCCAGCAAGACCCAGAAAACGTTCTGAGTGATTGGTCAGAGGAAAACAAAGATTATTGCAGTTGGAGAGGAGTAACATGCGGATCATCCATTAACTCTAACTCGGAATTGCAAGTGGTGAGTCTCAACCTTTCTGACTCGTCGCTCACCGGGTCAATATCACACTCACTCGCTCTCTTACGAAACCTGCACCACCTTGATCTCTCTTCCAACAACCTCAACGGTCCCATTCCACCTAATCTCTCTAACCTCACTTCATTGGAATCTTTGCTTCTCTTCTCTAACCAACTCACAGGTCATGTCCCCACTGAGTTGGGCTTGCTCACCAGTCTCCGAGTCATGCGACTCGGTGACAACGAACTAACGGGCATCATTCCCGCCTCTCTTGGAAACCTCGTCAACTTGGTCATCCTTGGTTTGGCTACCTGCAGACTCACCGGGTCGATTCCACCGCAACTCGGCCAACTCAGCAATATGGAGAATCTGATACTTAAGGACAACGAGTTAATGGGACCGATTCCGGCCGAGTTGGGAAACTGCACGAGCCTCACTGTCTTCACCGCAGCTAACAACAAGCTCAACGGGTCAATCCCGAGTGAACTGAGTCAACTCAAGACCCTTCAGATTCTCAACCTCGCCAACAACACCTTGTCAGGGGAGATACCGAGTCAACTCGGGGAGATGAGTGATCTCGTTTACCTCAATTTCATGGGGAACCAACTCGAGGGTGCTATTCCACCATCGTTATCTCAACTGGGGAACCTTCAAACTCTCGACTTGTCAATGAACAAGCTCAGTGGCGGAATCCCAGAAGAATTGGGGAACATGCGTGAGCTATCTTTTTTGGTTCTTTCTGGCAACAACAATCTTAGTGGTGTCATTCCAACAAACATATGTTCCAACGCAACAAAGTTGGAGCATATGTTTCTGTCTGATATTGGAATTCATGGTGAGATTCCATCTTCATTGGGCCAATGCCAGTCACTGAAACAACTTGACTTGTCCAACAACTCACTCAATGGGTCCATTCCCATTGAAATTTATGGATTGCTGTGGTTAACTGATCTCTTGCTCCACAACAACACGTTGGTTGGTTCAGTTTCTCCCTCAATTGGAAACCTCAGTAGCTTGCAGATACTTGCATTGTTCCACAACAATTTGCAGGGTCCTCTGCCTGAAGAGATTGGGATGCTTCGGGAGTTGGAAATCTTGTATCTTTATGATAATCAATTGTCAGGGGATATACCCATGGAGATTGGGAACTGTTCCAGCTTGCAAATGATTGATCTCTATGGGAATCATTTCAGTGGTGAAATTCCAAAATCCATTGGAAGGCTGAAAAAATTGAATTTCCTTCACCTAAGGCAGAATGACCTTGTTGGTGAAATTCCTGCCACACTTGGTAACTGTCATAAGCTGAATATTCTGGATTTAGCAGATAATCAACTCTCAGGTGGAATCCCTGCAACACTTGGATACCTCAAGTCATTGGAACAGTTGATGCTCTACAACAATTCTCTTGAAGGTAACCTCCCTCACCAACTCACAAATGTAGCAAACTTGACCAGAGTGAATCTTTCTAAGAACAGACTGAATGGTAGTATGACTGCATTGTGTAGCTCTAGATCGTTTCTTTCCTTCGATGTCACGAACAATGCCTTTGATGGTGAAATTCCTCCCCAATTAGGAAATTCACCCTCACTTGAGAGGCTAAGATTAGGTAACAATAGATTTTCTGGTGAAGTTCCAAGGACATTGGGAAAGATCCATGAGTTGACACTGTTAGACCTCTCAGGGAATGCACTCACTGGACCAATACCGGATGAGCTCTCTTTATGCAACAGACTGTCTCAAATTCATTTACACAATAATTCTATGTCTGGCCAAATACCAACTTGGGTTGGAAGTTTGCCTCAGCTTGGGGAGCTTACCCTTTCCTTCAATAATTTTTCTGGACCAATTCCATTAGGCTTATTCAGATGTTCCAAATTGCTGGTTCTTGACCTGAATGACAATTCTCTCAATGCTAGTCTCCCAGCTGAAGTTGGTGATCTTGCATCCCTTACCGTTCTCAGACTTGGCCGTAATAAGTTATCTGGACCGATCCCTGCAGCAATAGGCAAGTTGAGCAAGCTTTATGAGCTGCAGCTATCTAATAATAGCTTCAATGGTGAGATTCCAACAGAAATTGGAAAACTCCAAAATCTCCAGACCAGTTTAGACCTCGGTTACAACAATCTCTCAGGTGAAATCCCAGCTTCTCTTGGGAATCTGTTGAAATTGGAAGCACTTGATCTTTCCCACAATCAACTCACTGGAGAAGTCCCTCCACAAGTTGGTGACATGAGCAGTTTGGGAGTGCTTGATCTCTCCTACAACAACCTTCAAGGAAAATTGGACAGGAAATTCTCTCATTGGCCAGACGAGGCATTTGAAGGGAACCAACAGCTTTGTGGAAGCCCTCTTGATCACTGCAACAGTGATGATGCTTCCAGCAGAGATCAATCAGGCCTAAATGCACCATCAGTAGTGGTAATATCTGCCATTTCAACTCTAGCCGCAGTTGCGCTATTTATACTTGCATTCAGAGCCTTCTTCAGAAACAAACCAGAACATCTTAAGAGAGACAGTGAAGCGAATTATGTGTACTCCTCCTCTTCATCACAAGCACAGCGAAGGCCGCTGTTTCAACTCAACCCTGCTGGAAATCGAGATTTCAGGTGGGAAGATATCATGGATGCAACAAACAATCTAAGCGATGAATTCAAGATTGGTTCAGGGGGGTCAGGGACAATCTACAAAGCTGAATTGGCCAATGGAGATACAGTGGCTGTCAAGAAGATTTCAGCGAAAGATGATTTTCTGTTGAACAAAAGCTTCATAAGAGAAGTTAAGACACTTGGGAGGACAAGGCACAGGCATCTTGTGAAGCTTATAGGTTACTGTGGCAATAATGCAAACAAAGGAGCAGCTTGGAATCTGTTGATATATGAGTATATGGAGAATGGGAGTGTATGGGATTGGCTTCATGGGAAGCCAGCTACGGCCAGCAAAGTGAAGAGGAGCCTTGATTGGGAGACAAGGTTCAGAATTGCAGTGGGACTAGCTCAAGGAGTGGAGTACCTCCACCATGATTGTGTGCCAAAGATCATTCACAGGGATATCAAATCCAGCAACATATTGCTAGATTCCAAAATGGAAGCACACTTGGGAGATTTTGGACTTGCAAAAGCAATCTTCGAGAATTATGACTCCAGAACCGAGTCTAATTCTCTGTTTGCAGGATCTTACGGCTACATGGCTCCAGAGTACGCATACTCCCTACGTGCAACAGAAAAGAGTGATGTTTACAGCATGGGAATTGTGCTTATGGAGCTTGTTAGTGGTAAAACACCAACAGATGAAACTTTTGGAGCAGAGATGGATATGGTGAGATGGGTGGAGATGCACATGGATATGCATGGCGCTGCACGCGAGGAGGTGATAGATCCTGAGCTGAAACCTCTGTTGCCTGCTGAAGAGTTTGCGGCATTCCAAGTGCTTGAGGTAGCATTGCAGTGCACCAAAACTACACCACAGGAGAGGCCATCCTCCCGGAAAGTATGTGATCTTCTCCTCCATGTATTCAACAACAGGATGGCCCAGTTTGATAAGATGAATTTGGATCAGTACAAATTCAAGTGA 3810 0.4475 MRRVSSAVMILLWLFSSTMIIGNSSSLHSETTLRVLLEVKKSFQQDPENVLSDWSEENKDYCSWRGVTCGSSINSNSELQVVSLNLSDSSLTGSISHSLALLRNLHHLDLSSNNLNGPIPPNLSNLTSLESLLLFSNQLTGHVPTELGLLTSLRVMRLGDNELTGIIPASLGNLVNLVILGLATCRLTGSIPPQLGQLSNMENLILKDNELMGPIPAELGNCTSLTVFTAANNKLNGSIPSELSQLKTLQILNLANNTLSGEIPSQLGEMSDLVYLNFMGNQLEGAIPPSLSQLGNLQTLDLSMNKLSGGIPEELGNMRELSFLVLSGNNNLSGVIPTNICSNATKLEHMFLSDIGIHGEIPSSLGQCQSLKQLDLSNNSLNGSIPIEIYGLLWLTDLLLHNNTLVGSVSPSIGNLSSLQILALFHNNLQGPLPEEIGMLRELEILYLYDNQLSGDIPMEIGNCSSLQMIDLYGNHFSGEIPKSIGRLKKLNFLHLRQNDLVGEIPATLGNCHKLNILDLADNQLSGGIPATLGYLKSLEQLMLYNNSLEGNLPHQLTNVANLTRVNLSKNRLNGSMTALCSSRSFLSFDVTNNAFDGEIPPQLGNSPSLERLRLGNNRFSGEVPRTLGKIHELTLLDLSGNALTGPIPDELSLCNRLSQIHLHNNSMSGQIPTWVGSLPQLGELTLSFNNFSGPIPLGLFRCSKLLVLDLNDNSLNASLPAEVGDLASLTVLRLGRNKLSGPIPAAIGKLSKLYELQLSNNSFNGEIPTEIGKLQNLQTSLDLGYNNLSGEIPASLGNLLKLEALDLSHNQLTGEVPPQVGDMSSLGVLDLSYNNLQGKLDRKFSHWPDEAFEGNQQLCGSPLDHCNSDDASSRDQSGLNAPSVVVISAISTLAAVALFILAFRAFFRNKPEHLKRDSEANYVYSSSSSQAQRRPLFQLNPAGNRDFRWEDIMDATNNLSDEFKIGSGGSGTIYKAELANGDTVAVKKISAKDDFLLNKSFIREVKTLGRTRHRHLVKLIGYCGNNANKGAAWNLLIYEYMENGSVWDWLHGKPATASKVKRSLDWETRFRIAVGLAQGVEYLHHDCVPKIIHRDIKSSNILLDSKMEAHLGDFGLAKAIFENYDSRTESNSLFAGSYGYMAPEYAYSLRATEKSDVYSMGIVLMELVSGKTPTDETFGAEMDMVRWVEMHMDMHGAAREEVIDPELKPLLPAEEFAAFQVLEVALQCTKTTPQERPSSRKVCDLLLHVFNNRMAQFDKMNLDQYKFK* 1270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4334 1269 SMART LRR_typ_2 440 464 IPR003591 -
Ahy13g4334 1269 SMART LRR_typ_2 679 703 IPR003591 -
Ahy13g4334 1269 SMART LRR_typ_2 800 823 IPR003591 -
Ahy13g4334 1269 SMART LRR_typ_2 488 512 IPR003591 -
Ahy13g4334 1269 SMART LRR_typ_2 727 751 IPR003591 -
Ahy13g4334 1269 SMART LRR_typ_2 824 855 IPR003591 -
Ahy13g4334 1269 SMART LRR_typ_2 294 318 IPR003591 -
Ahy13g4334 1269 SMART LRR_typ_2 631 655 IPR003591 -
Ahy13g4334 1269 SMART LRR_typ_2 246 270 IPR003591 -
Ahy13g4334 1269 SMART LRR_typ_2 368 392 IPR003591 -
Ahy13g4334 1269 SMART LRR_typ_2 775 799 IPR003591 -
Ahy13g4334 1269 SMART LRR_typ_2 536 560 IPR003591 -
Ahy13g4334 1269 SMART LRR_typ_2 174 198 IPR003591 -
Ahy13g4334 1269 SMART LRR_typ_2 102 126 IPR003591 -
Ahy13g4334 1269 SMART LRR_typ_2 150 173 IPR003591 -
Ahy13g4334 1269 Pfam Leucine Rich Repeat 104 126 IPR001611 GO:0005515
Ahy13g4334 1269 Pfam Leucine rich repeat N-terminal domain 34 69 IPR013210 -
Ahy13g4334 1269 Gene3D Transferase(Phosphotransferase) domain 1 1042 1267 - -
Ahy13g4334 1269 Gene3D Ribonuclease Inhibitor 29 185 IPR032675 -
Ahy13g4334 1269 SMART serkin_6 960 1252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g4334 1269 ProSitePatterns Protein kinases ATP-binding region signature. 966 989 IPR017441 GO:0005524
Ahy13g4334 1269 Gene3D Ribonuclease Inhibitor 581 876 IPR032675 -
Ahy13g4334 1269 Gene3D Ribonuclease Inhibitor 391 481 IPR032675 -
Ahy13g4334 1269 Pfam Leucine rich repeat 753 813 IPR001611 GO:0005515
Ahy13g4334 1269 PRINTS Leucine-rich repeat signature 800 813 - -
Ahy13g4334 1269 PRINTS Leucine-rich repeat signature 371 384 - -
Ahy13g4334 1269 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 4 1264 - -
Ahy13g4334 1269 SUPERFAMILY RNI-like 583 839 - -
Ahy13g4334 1269 Gene3D Phosphorylase Kinase; domain 1 920 1041 - -
Ahy13g4334 1269 Pfam Protein kinase domain 964 1244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g4334 1269 SUPERFAMILY L domain-like 44 406 - -
Ahy13g4334 1269 SUPERFAMILY Protein kinase-like (PK-like) 942 1247 IPR011009 -
Ahy13g4334 1269 ProSiteProfiles Leucine-rich repeat profile. 104 127 IPR001611 GO:0005515
Ahy13g4334 1269 Gene3D Ribonuclease Inhibitor 285 390 IPR032675 -
Ahy13g4334 1269 Gene3D Ribonuclease Inhibitor 186 284 IPR032675 -
Ahy13g4334 1269 SUPERFAMILY L domain-like 342 669 - -
Ahy13g4334 1269 Gene3D Ribonuclease Inhibitor 482 580 IPR032675 -
Ahy13g4334 1269 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE GSO1 4 1264 - -
Ahy13g4334 1269 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1092 1104 IPR008271 GO:0004672|GO:0006468
Ahy13g4334 1269 ProSiteProfiles Protein kinase domain profile. 960 1252 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4334 Ahy-Chr13 143018374 143023048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g4334 27 1250 Receptor kinase-like Gene Family AT5G07280 36.436 0.0 609
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Ahy13g4334 Pkinase 9.30E-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4334 - - gmx:100801889 1915.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4334 13 143018374 143023048 Ahy3g4057 3 140007144 140011832 hybridization