Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4333 ATGATGAGTTGTTCAGTAGCAGCAGCACACTCATCAGTTGGAACATGTACATGGATGCGGCTTCACCCGCAAAAGAGAACCCCAACCACTCTTGCACTCTCCTCCACTCATCACAAATGTTCGTACAAGCAACAACAACTAGAACTAGTAGTCACTCCTCCCCTCTTAAAGAGAAGAGATGCAATAGGCCTTGGGCTTGGGCTTCTCCATTCCTTCTTGCAGCCACAGTCCTCATCAGCAGCTGAATCAGCACCATGTGAATTAACAGTAGCTCCTTCTGGCCTTGCCTTCTGTGACAAACTTGTTGGAACTGGCCCTCAGGCCGTTAAAGGCCAGCTTATTAAGGCACACTATGTTGGGAGACTGGAGAATGGCAAAGTTTTCGATAGCAGCTACAATCGCGGCAAGCCACTTACATTCCGCGTCGGCGTTGGAGAGGTCATCAAAGGATGGGATGAAGGCATTTTAGGAGGTGATGGAATTCCTCCAATGCTTCAAGGAGGGAAACGTACGTTGAAGCTTCCACCAGAACTCGGATATGGTTCAAGAGGAGCGGGTTGTAGAGGAGGTTCATGTGTCATTCCACCTGATTCAATACTCTTGTTTGATGTGGAATTTGTTAGCAAAGCATGA 633 0.4787 MMSCSVAAAHSSVGTCTWMRLHPQKRTPTTLALSSTHHKCSYKQQQLELVVTPPLLKRRDAIGLGLGLLHSFLQPQSSSAAESAPCELTVAPSGLAFCDKLVGTGPQAVKGQLIKAHYVGRLENGKVFDSSYNRGKPLTFRVGVGEVIKGWDEGILGGDGIPPMLQGGKRTLKLPPELGYGSRGAGCRGGSCVIPPDSILLFDVEFVSKA* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4333 210 SUPERFAMILY FKBP-like 88 208 - -
Ahy13g4333 210 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP13, CHLOROPLASTIC 22 209 - -
Ahy13g4333 210 PANTHER - 22 209 IPR044609 GO:0000413|GO:0003755|GO:0061077
Ahy13g4333 210 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 111 210 IPR001179 GO:0003755
Ahy13g4333 210 Gene3D - 82 210 IPR046357 GO:0003755
Ahy13g4333 210 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 106 206 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4333 Ahy-Chr13 143008883 143011901 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g4333 77 208 Calmodulin-binding Proteins AT5G48570 36.620 1.60e-17 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4333 K01802 - vvi:100262788 265.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4333 13 143008883 143011901 Ahy13g4333 13 143008883 143011901 ECH
Ahy13g4333 13 143008883 143011901 Ahy3g4056 3 139996879 140000037 hybridization