Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4323 ATGGGAGAGCTTCTTGCAAGTTACAACATCATAGGTGCAGATCAAGTAGTGTCCCCTGTGCAATTATCATCAGTGTTATCTTCTCTGGCCAGCAGTGGTAGCATTACTACTCCTACTCCTACTCCTACTCCTACTCCTACCCCAACAGCTGCAATACCATGTTTGATTGATCCTCAGATTGAAACTTCTCTCTGCCAACGCTTCCATTCACTCTGCCGCCAAAACACTACTCCTACTCCTCCTCAAGGAGCTCAAAGTAGCAATAGTATTATTCGTCCTTTTAATGGCGATCGTGATCATCAAGATATGATTCCTGCTCAATCTGCTGCTGCTACTCCGAGTGCCGTCGCTGTTGCGGAGGTAGTGAGCTTCTTCACAGAGGAGGAGATAGTAAGAATGAAAGAGGCGGCGACTAAAGCCGTGGACGAAGTAGCGAGGCTTCTGCGGATGAACGAGCCTTTCTGGTTTAGGTCAACAGTTGATGGAAACTTCATTCTTCAGCGTCAAAGCTACGACGGCGTTTTCCACAATGTTGGGTTGAAGTGTGAAGCACGCAGAGAGGCATCAAAAGATTCACGAGTGGTGGCTATGAGCGGCAGGAAATTGGTTGATATGTTCTTAGATTCGGAAAAATGGGTTTCCATTTTCCCAACAATGGTTAAAAAAGCAGATACAATCGAAGTACTCAACACCGGTTTGCCACAGACCCGAAGTGGAGCCTTGCAACTGATGTATGCAGATATACATATTCTTTCACCGTTACTTAGATCTCGGGAATTCTTCTTCCTGCGGTACTGTGTGCAAGTTGATGTAGGTGCATGGATCATAGCAGATGTCTCATTTGATTCCTCCAGATTCCTTCATTCCCTCACTTGGAAGCTTCCCTCTGGATGCTTAATCCACGACATGAACGATGGATATTCCACCATTACTTGGGTGGAACATGTGGAAATAAGTGACAGTATCCAAACGAATCCGATTTTTAGAGACCTAGTTTGTAGCAACAGTGCATTTGGAGCAGAAAGATGGATTCTGACACTCGAAAGGATGTGCGAGAGAATTGCATTCGCCTCAATGAACATGATGCCTAGTTGTGACAGTGGAGTGATTGCTTCACCTGAAGGACGAAAGAACGTGATGGAATTTTCTGAGAGGATGGTAAAGCTCTTCTGTGGGTCTCTGGACATGTCAGGTAACATGGAGTTGCAATATGGGAAGAACAACAATGGTGTAAGAGTTGGTATTCGAAGAAGTATAGAGGCTGGTGTGCCTAAGGGCTTGATTGTCACTGCATCTATCTCCCTTTGGCTTCCTCTCTTGCCACAAGCACTCTTTAACTTTTTCAAAGATCCATCAACTAGACAACAGTGGGATGTTCTGTGCCATGGAAATCCAGTGACTCAGATTCAGCGCATCTCAAATGGAACTTTTTCTGATAACTTTACAACAATTCTTCGGCCTTATATTCCTACGGAGAACAACACGCTTCTTCTCCAAGAATGCTGCACGGATTTCTTGGGAAGCGTGGTGGTGTATGCTCCGGTTGATGTTGGCACAATAACTGCGGCAATCAACGGAGAGGACACCACCACGATGCCTATTCTCCCCTCCGGCTTCACCATATGCGGAGATGGATCTCCTCCGCGAGGAGCTTTCTTTGGCTGTGCGCTTCCAGAATCGAGACATTACGGTGGCTCCATACTAACGGTGACCGTACAGGTGCTAGTTAGTAACCAAAATGCGGTGGGGCAGTTCAACATGAACACCGTTGATGCTGTCAATGGACTCGCAGCCACCACTGTCAAGAAAATTAAAGCCGCCTTCAAATGTCCCTGA 1836 0.4624 MGELLASYNIIGADQVVSPVQLSSVLSSLASSGSITTPTPTPTPTPTPTAAIPCLIDPQIETSLCQRFHSLCRQNTTPTPPQGAQSSNSIIRPFNGDRDHQDMIPAQSAAATPSAVAVAEVVSFFTEEEIVRMKEAATKAVDEVARLLRMNEPFWFRSTVDGNFILQRQSYDGVFHNVGLKCEARREASKDSRVVAMSGRKLVDMFLDSEKWVSIFPTMVKKADTIEVLNTGLPQTRSGALQLMYADIHILSPLLRSREFFFLRYCVQVDVGAWIIADVSFDSSRFLHSLTWKLPSGCLIHDMNDGYSTITWVEHVEISDSIQTNPIFRDLVCSNSAFGAERWILTLERMCERIAFASMNMMPSCDSGVIASPEGRKNVMEFSERMVKLFCGSLDMSGNMELQYGKNNNGVRVGIRRSIEAGVPKGLIVTASISLWLPLLPQALFNFFKDPSTRQQWDVLCHGNPVTQIQRISNGTFSDNFTTILRPYIPTENNTLLLQECCTDFLGSVVVYAPVDVGTITAAINGEDTTTMPILPSGFTICGDGSPPRGAFFGCALPESRHYGGSILTVTVQVLVSNQNAVGQFNMNTVDAVNGLAATTVKKIKAAFKCP* 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4323 611 ProSiteProfiles START domain profile. 126 356 IPR002913 GO:0008289
Ahy13g4323 611 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 128 609 IPR042160 -
Ahy13g4323 611 SUPERFAMILY Bet v1-like 127 354 - -
Ahy13g4323 611 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG10-RELATED 128 609 - -
Ahy13g4323 611 MobiDBLite consensus disorder prediction 31 50 - -
Ahy13g4323 611 MobiDBLite consensus disorder prediction 75 94 - -
Ahy13g4323 611 SUPERFAMILY Bet v1-like 373 574 - -
Ahy13g4323 611 SMART START_1 135 353 IPR002913 GO:0008289
Ahy13g4323 611 MobiDBLite consensus disorder prediction 75 101 - -
Ahy13g4323 611 Pfam START domain 138 353 IPR002913 GO:0008289
Ahy13g4323 611 CDD START_ArGLABRA2_like 131 352 - -
Ahy13g4323 611 Gene3D - 134 332 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4323 Ahy-Chr13 142828267 142835487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g4323 102 611 Homeobox Transcription Factor Family AT1G73360 40.385 3.76e-122 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4323 K09338 - qsu:111982963 493.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4323 13 142828267 142835487 Ahy3g4051 3 139870069 139878782 hybridization