Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4322 ATGGCTTCTCCAATGGGGTCATCATCAACGGCTGGTGGTGCTACTGATGGTACTGATGATGAGGGGCAAAATCGTCCTCAAAATTCTCGAAGGTTTTACCATCGTCACACTCCCCATCAGATAGCAAAGCTTGAGGAAGCGTTCAACGCATGTGCACATCCAAATGATAGCATGCGGCGACAACTAGGCACAGAACTAGGGCTTGAACCCAGACAAGTCAAATTTTGGTTTCAGAATAGGAGGACCCAAGCAAAGGCTCAAGCTGATAGATCAAATAACTGTGCTCTTCGGCGAGAGAATGAGAGAATGATGGCAGAAAACTTGATGTTCAGAGAGTCCTTGAAGAATGTAGTTTGCGTAACTTGTGGTGGTCCAACCGTAACGGAGGATGATTGCCAAATTCGCTTGGAACAATTCAAGTTGGAAAATGATTTTCTTGTGCAAGAGGCTAGTACTTCTAATTAG 465 0.4495 MASPMGSSSTAGGATDGTDDEGQNRPQNSRRFYHRHTPHQIAKLEEAFNACAHPNDSMRRQLGTELGLEPRQVKFWFQNRRTQAKAQADRSNNCALRRENERMMAENLMFRESLKNVVCVTCGGPTVTEDDCQIRLEQFKLENDFLVQEASTSN* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4322 154 MobiDBLite consensus disorder prediction 1 30 - -
Ahy13g4322 154 SMART HOX_1 29 91 IPR001356 GO:0003677
Ahy13g4322 154 Pfam Homeodomain 30 85 IPR001356 GO:0003677
Ahy13g4322 154 MobiDBLite consensus disorder prediction 1 22 - -
Ahy13g4322 154 SUPERFAMILY Homeodomain-like 10 86 IPR009057 -
Ahy13g4322 154 CDD homeodomain 30 87 IPR001356 GO:0003677
Ahy13g4322 154 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 20 144 IPR042160 -
Ahy13g4322 154 Gene3D - 16 106 - -
Ahy13g4322 154 ProSiteProfiles 'Homeobox' domain profile. 27 87 IPR001356 GO:0003677
Ahy13g4322 154 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ROC8 20 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4322 Ahy-Chr13 142826121 142828145 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g4322 33 145 Homeobox Transcription Factor Family AT1G17920 50.427 2.96e-38 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Ahy13g4322 Homeodomain 6.60E-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4322 K09338 - aip:110269545 293.123