Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4319 ATGCCGGTGGCAAAGCGAGAAACGAGTGATGGCAGAGTCATCGCTCACGTCGACATGGATTGCTTCTACGTTCAAGTGGAGCAGAGGAAGCAGCCAAATTTACGGGGCTTACCCACTGCAGTCATACAATACAACTCATTCAAAGGTGGCGCTTTGATTGCCGTTAGCTACGAGGCTCGCAACTTTGGTGTCAAACGTTCAATGCGTGGTGATGAAGCAAAGGACGTGTGCCCGCAAATTCACCTGGTCCAAGTCCCTGTGGCGCGTGGTAAAGCCGATCTCAATAGCTACAGGAACGCAGGATCTGAGGTTGTTTCTATTCTTTCAAAGAAGGGTCGTTGTGAGAGGGCTTCGATTGATGAGGTGTATCTTGATCTCACTGATGCTGCTGAAACAATGTTATTGGAAATGCCTCCAGAAGCTAGAGAGGATATTGAAGAGGAAGTTCTGAAGTCACATGTTTTGGGACTTGAAATTAAGGAGGGAAGTGATGCCAAAGAAGAAGTCAGGAAATGGATTCGTAGGGGTGATGCTACTTACCAAGACAAACTTTTAGCTTGTGGGGCCTTTATTGTTGCCAACCTTAGGATGCAAGTGTTGAAAGATACAGAATTCACCTGTTCTGCTGGTATTGCTCATAATAAGATGCTAGCGAAACTAGCCAGTGGAATGAACAAACCTGCACAACAAACTGTTGTGCCACAGTCATCGGTTGGAGGGTTGCTTGAGTCTTTGCCAATAAAGAAAATGAAACAGCTGGGGGGAAAGCTGGGCAGTTCCTTACAAAGTGATCTCGGTTGCAAAACTGTTGGTGATTTGCTTCAGTTTTCAGAGGAGAAGCTACAGCAGTGTTATGGGATCAATACTGGTACCTGGTTGTGGAATATTGCAAGAGGAATAAATGGCGAAGAAGTTGAGGGGCGACTACTTCCCAAGAGCCATGGTTCTGGCAAAACATTTCCTGGGCCTCAAGCTTTGAAGACACTTGCCTCTGTTCAGCACTGGCTTAATGAATTGTGCGAAGAGCTAAGTGAACGTCTTCAGTCTGACCTGAACCAAAACAAACGGATTGCGCACACACTAACACTGCATGCTAGAGCATATAAGAAAGGAGAATCAGATTCACTTAGAAAGTTCCCTTCTAAATCTTGTCCTTTAAGATACGGAACTACAAAGATTCAAGAAGATGCCCTCACTCTGTTTCAAGCTGCATTACGTGAATTTTTGGGCTTTTGCAACTCTAAGACTCATGGGAATGAAAATAACAACTGGGGAGTTACATCACTGTCTGTTTCTGCTAGTAAGATAGTCCCCATACCATCTGGGACACATTCCATTGTAAAATATTTTGGTGGGCAAGTTCCATCTAGCTCATCATTTAATCAACCACTAGGCAATGCATTTGATGAAGCTGTACCATCATCTCCGTCAGGTAGTGAAAATTGTTCAGGATTAATTTCCTATGAATTACAGCAAAATTATCCTGAAGGAGATACGGAAATTAAGAATTCAGAGGCTTGTTTGCATGAACAGGATCCATTGTGTAATTTATCCAGGAAAGTAGATAGCTCGCTCAAAGAATCCTCCCTTGAGTCACCTGCAGGAAGTGAACACAGAACAACAAAGAGTGAACCATATAGAGATTTACCTGCAAAAGATCATAGGCCTCTTTCTAGTACACCCAGTTTGAAAGCAGTTGAGAAGAAAAAGACTGCGGGAAATAACCTTAAGGGGAATTATTCAATTATGGATTTCTTCAATAATTACCAAAATTCCCAGTCTTCGTTGGAGCATAAGAATGTGACAAATGCCCATGATGTTAAAACAGCATCATCCTTTGGACTTCCGTCTACCATGGATAGCTATTCAACATGCAATCAAATTGAGCAGCCAGCTGAGAGATGTCGTGAAGAGATTGATAGTAACGTTGGGGAATGTAGTGTGCCTAATATGTCACAACGGCGACAAGCTTGGGACTATAACATTGATGAGATTGACCACTCTGTCATTGAAGAATTACCACCAGAAATCCAGCAAGAGTTTCAAGCCTGGCTTCGACCTCACAAGCGGCCTAATGTACCTAACAGTAAAAGAGGTTCCAGTATTACTCACTATTTCTTACCAGACAAAAGTAGATGA 2139 0.4306 MPVAKRETSDGRVIAHVDMDCFYVQVEQRKQPNLRGLPTAVIQYNSFKGGALIAVSYEARNFGVKRSMRGDEAKDVCPQIHLVQVPVARGKADLNSYRNAGSEVVSILSKKGRCERASIDEVYLDLTDAAETMLLEMPPEAREDIEEEVLKSHVLGLEIKEGSDAKEEVRKWIRRGDATYQDKLLACGAFIVANLRMQVLKDTEFTCSAGIAHNKMLAKLASGMNKPAQQTVVPQSSVGGLLESLPIKKMKQLGGKLGSSLQSDLGCKTVGDLLQFSEEKLQQCYGINTGTWLWNIARGINGEEVEGRLLPKSHGSGKTFPGPQALKTLASVQHWLNELCEELSERLQSDLNQNKRIAHTLTLHARAYKKGESDSLRKFPSKSCPLRYGTTKIQEDALTLFQAALREFLGFCNSKTHGNENNNWGVTSLSVSASKIVPIPSGTHSIVKYFGGQVPSSSSFNQPLGNAFDEAVPSSPSGSENCSGLISYELQQNYPEGDTEIKNSEACLHEQDPLCNLSRKVDSSLKESSLESPAGSEHRTTKSEPYRDLPAKDHRPLSSTPSLKAVEKKKTAGNNLKGNYSIMDFFNNYQNSQSSLEHKNVTNAHDVKTASSFGLPSTMDSYSTCNQIEQPAERCREEIDSNVGECSVPNMSQRRQAWDYNIDEIDHSVIEELPPEIQQEFQAWLRPHKRPNVPNSKRGSSITHYFLPDKSR* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4319 712 PIRSF DNA_pol_eta 6 703 - -
Ahy13g4319 712 PANTHER DNA POLYMERASE ETA 6 700 - -
Ahy13g4319 712 Gene3D - 305 437 IPR036775 GO:0003684|GO:0006281
Ahy13g4319 712 SUPERFAMILY Lesion bypass DNA polymerase (Y-family), little finger domain 310 438 IPR036775 GO:0003684|GO:0006281
Ahy13g4319 712 MobiDBLite consensus disorder prediction 526 569 - -
Ahy13g4319 712 MobiDBLite consensus disorder prediction 688 712 - -
Ahy13g4319 712 Pfam impB/mucB/samB family 17 222 IPR001126 GO:0006281
Ahy13g4319 712 Gene3D - 247 303 - -
Ahy13g4319 712 Gene3D - 21 88 - -
Ahy13g4319 712 MobiDBLite consensus disorder prediction 537 554 - -
Ahy13g4319 712 Pfam impB/mucB/samB family C-terminal domain 311 439 IPR017961 GO:0003684|GO:0006281
Ahy13g4319 712 ProSiteProfiles UmuC domain profile. 14 254 IPR001126 GO:0006281
Ahy13g4319 712 PANTHER DNA POLYMERASE ETA 6 700 - -
Ahy13g4319 712 SUPERFAMILY DNA/RNA polymerases 8 305 IPR043502 -
Ahy13g4319 712 Gene3D - 89 233 IPR043128 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4319 Ahy-Chr13 142802755 142807919 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4319 K03509 - gmx:100780894 1091.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4319 13 142802755 142807919 Ahy13g4319 13 142802755 142807919 ECH