Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4316 ATGGAAAGTTTTCATCATCACCATTCTTCTATCACCTCTCCTTTCTCTTATACCTTTGCCATTACGGGCACCGCAGCAACATCAAGCACCTTCAACACCACACCATGGATGAACAGCAGAATATGGAGCAAGCTTCCTCAGAGGCTCATTGATCGCATCCTCGCCTTCCTCCCTCCTCCTGCTTTTTTCCGAGCTCGTTCTGTGTGCAAGAGATGGTATGCCCTTCTCTTCTCCAACTCTTTTCTCGAATTATACCTTCAAGTCTCACCCAGACGCCACTGGTTCATCTTCTTCAACCACAAGATCAGCAAAAGCTACATCTACAAGAACAACAACAATGGCGCTACTGGCACTGCCTCCAACCACAACAATGACGGTTACCTCTTTGATCCCTATGACATGGCATGGTATCGAATCTCCTTCGCTCTCATCCCATCTGGATTCTCTCCCGCTTCTTCTTCCTCGGGATTACTGTGTTGGGTTTCTGATGAAGCTGGTCCCAAAACCATGCTTCTCTGCAACCCTATCATCGGTTCTCTTACTCAGTTACCACCCACACCCAGGCCAAGACTTTTCCCTTCCATTGGCTTAACCGTTACTCCAACCTGCATAGACGTCACAGTCGCTGGCGACGACATGATTTCCCCCTACGCCGTCAAGAACTTAACATCAGAGAGCTTTCACATCGACGGAGGGGGATTCTACTCCATCTGGGGAACAACTTCTTCTCTTCCTCGGCTTTGCAGTCTTGAATCTGGAAGAATGGTTTATGCAGAAGGAAAATTCTACTGCATGAATTGCAGTCCCTTCAGTGTTATGGCGTTTGACATAACCTCCAACGCGTGGTTCAAGATCCAAGCTCCCATGAGAAGGTTCTTGCGCTCTCCCAGCTTGCTTGAGTGTAAGGGCAAGCTCCTCCTCATCGCCGCCGTTGAGAAGAGCAAGCTCAACGTCCCCAAAAGCTTGAGGGTTTGGACCTTGCAATCTTGCGGAACAATGTGGGTGGAGAGTGAGAGGATGCCGCAGCAGCTATACGTTCAGTTTGCGGAATTGGAGGGTGGGAATGGGTTTGAGTGTGTAGGGCATGGAGAATTCATTGTCATAATCATCCGTGGCACCGACAAAGCGTTGTTGTTTGACATTTCTAGGAAGAGGTGGCAATGGATTCCGCCCTGTCCTTATCGTCGTCATCATCATCATGGGTTTGTTGATGAGTTGCATGGTTTTGCATATGAGCCTAGACTTGCTACTCCCGTTACCGGACTTCTTGATCACTTGGCACTCCCCTTTCAGAACTTTAATGCTTAA 1308 0.4855 MESFHHHHSSITSPFSYTFAITGTAATSSTFNTTPWMNSRIWSKLPQRLIDRILAFLPPPAFFRARSVCKRWYALLFSNSFLELYLQVSPRRHWFIFFNHKISKSYIYKNNNNGATGTASNHNNDGYLFDPYDMAWYRISFALIPSGFSPASSSSGLLCWVSDEAGPKTMLLCNPIIGSLTQLPPTPRPRLFPSIGLTVTPTCIDVTVAGDDMISPYAVKNLTSESFHIDGGGFYSIWGTTSSLPRLCSLESGRMVYAEGKFYCMNCSPFSVMAFDITSNAWFKIQAPMRRFLRSPSLLECKGKLLLIAAVEKSKLNVPKSLRVWTLQSCGTMWVESERMPQQLYVQFAELEGGNGFECVGHGEFIVIIIRGTDKALLFDISRKRWQWIPPCPYRRHHHHGFVDELHGFAYEPRLATPVTGLLDHLALPFQNFNA* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4316 435 ProSiteProfiles F-box domain profile. 39 88 IPR001810 GO:0005515
Ahy13g4316 435 SMART fbox_2 45 85 IPR001810 GO:0005515
Ahy13g4316 435 Gene3D - 37 83 - -
Ahy13g4316 435 PANTHER F-BOX/KELCH-REPEAT PROTEIN 42 416 - -
Ahy13g4316 435 PANTHER PROTEIN UNUSUAL FLORAL ORGANS 42 416 - -
Ahy13g4316 435 Pfam F-box domain 42 78 IPR001810 GO:0005515
Ahy13g4316 435 SUPERFAMILY Galactose oxidase, central domain 67 405 IPR011043 -
Ahy13g4316 435 Gene3D - 159 411 IPR015915 GO:0005515
Ahy13g4316 435 SUPERFAMILY F-box domain 35 139 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4316 Ahy-Chr13 142758503 142760215 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4316 - - gmx:100805253 737.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4316 13 142758503 142760215 Ahy13g4316 13 142758503 142760215 ECH
Ahy13g4316 13 142758503 142760215 Ahy3g4045 3 139802173 139803898 hybridization