Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4279 ATGGCCGATGAACCAATGCCCACTCGCTGGTCCTTCCAGGACTTCAAATTGAATTATGATGCGATGTTTGGGAGGAAGAAAGTGGTGGAGAATGGTGAGGCTGCTGATAAAGCTGTTGGTAATGGAAACTCATTGAACCATGCATCCAACGGCAATCTGCAAGCTAAAAGATCATCTGATATGACAATCTTTGAGCAGTTTCAGAGCCAGGGGCAGAATCCTGCGCAGACAAATGGCTTTTCACCAAACCATGGGGACGAAAGGCCGCAAAAGTCTTTGCTTCCACCTTTTGAATCTGCAGAGATGCGTGCTTTAGCAGAGAGCTTAAGTAGGGATATAATTCGTGGGAGTCCAAATGTGAAGTGGGAAAGCATCAAGGGGTTAGGGAATGCCAAACTTTTGCTAAAAGAGGCTGTTGTGATGCCAATTAAGTATCCCAAGTACTTTACTGGTCTGTTATCTCCATGGAAAGGCATTCTCCTTTTTGGCCCACCAGGGACAGGAAAGACAATGCTTGCAAAGGCTGTTGCAACAGAGTGCCAGACTACATTTTTTAATATTTCAGCATCATCTGTTGTCAGCAAATGGCGAGGTGATTCCGAGAAGTTGATAAAGGTGTTATTTGAGCTTGCAAGACACCATGCCCCCTCAACCATATTTCTTGATGAAATTGATGCAATCATTAGTCAACGCGGTGAAGCACGCAGTGAACATGAAGCAAGTAGACGACTAAAAACTGAACTACTCATACAGATGGACGGTTTGGCCAAGACTGATGAGCTTGTTTTTGTTTTGGCGGCAACAAATCTTCCCTGGGAATTGGATGCAGCTATGCTCCGCCGTCTTGAGAAGCGAATCCTTGTACCACTCCCAGAACCAGAAGCAAGAAGATCCATGTTCGAGGAACTCCTTCCTCCGCAGCCTGATGAGGAAGAGATCCCCTATGATTTGCTAGTGGAGCGGACCGAAGGATATTCAGGGTCAGATATCCGGTTACTCTGCAAAGAGACAGCGATGCAGCCTTTGAGACGCCTAATGTCTCAACTTGAACAGAGACAAGAGGTGGTACCGGAAGAAGAGTTGCCAAAAGTTGGGCCAATCAGGTATGAAGATATAGAAGCAGCATTGAAAAACACAAGGCCATCTGCTCACCTGCATGCCCATAAATATGAAAAGTTTAATGCTGATTATGGCAGTCAAATACTTCACTGA 1212 0.4546 MADEPMPTRWSFQDFKLNYDAMFGRKKVVENGEAADKAVGNGNSLNHASNGNLQAKRSSDMTIFEQFQSQGQNPAQTNGFSPNHGDERPQKSLLPPFESAEMRALAESLSRDIIRGSPNVKWESIKGLGNAKLLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECQTTFFNISASSVVSKWRGDSEKLIKVLFELARHHAPSTIFLDEIDAIISQRGEARSEHEASRRLKTELLIQMDGLAKTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRSMFEELLPPQPDEEEIPYDLLVERTEGYSGSDIRLLCKETAMQPLRRLMSQLEQRQEVVPEEELPKVGPIRYEDIEAALKNTRPSAHLHAHKYEKFNADYGSQILH* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4279 403 MobiDBLite consensus disorder prediction 69 93 - -
Ahy13g4279 403 Pfam AAA+ lid domain 316 352 IPR041569 -
Ahy13g4279 403 Pfam ATPase family associated with various cellular activities (AAA) 159 289 IPR003959 GO:0005524|GO:0016887
Ahy13g4279 403 CDD AAA 153 290 - -
Ahy13g4279 403 SMART AAA_5 155 292 IPR003593 -
Ahy13g4279 403 MobiDBLite consensus disorder prediction 69 85 - -
Ahy13g4279 403 PANTHER AAA DOMAIN-CONTAINING 9 401 - -
Ahy13g4279 403 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 118 386 IPR027417 -
Ahy13g4279 403 PANTHER KATANIN P60 ATPASE-CONTAINING SUBUNIT A-LIKE 2 ISOFORM X1 9 401 - -
Ahy13g4279 403 Gene3D - 118 394 IPR027417 -
Ahy13g4279 403 Gene3D - 291 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4279 Ahy-Chr13 142340162 142345387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g4279 153 362 Calmodulin-binding Proteins AT3G56690 35.681 5.10e-31 124
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4279 13 142340162 142345387 Ahy3g4012 3 139366014 139371221 hybridization