Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4263 ATGCGAAGAATTCAAGGAGAAGAAACGGAGGGAGTGACAGTGACATGGGAGAATTTGTGGGTGACTGTTCCAAACGGAAAGAATACACTACCAATTCTGCAGGGCCTTACAGGCTATGCACAACCGGGGAGGCTTTTGGCTATAATGGGACCTTCCGGCTGTGGCAAAACCACACTTCTTGATGCCTTATCAGGAAGATTGAGCTCAAACATAAAGCAGAAAGGGAATATTCTAATAAATGGCCATAAACAAGAACTGGCTTATGGAATATCAGGATATGTAACACAAGACGATGCTTTGCTGTCAACTTTAACAGCTGGGGAAACTTTATACTACTCGGCACAGCTTCAATTTCCTGATTCCATGCCCGTATCAGAGAAGAAGGAAAGAGCTGATGTAACTCTCAGGGAAATGGGTCTGCAAAACGCCATTCACACAAGGGTTGGAGGCTGGAGTTCTAAGGGTCTCAGTGGGGGACAGAAAAGGAGACTCAGCATTTGCATTGAGATCTTAACACGCCCAAGACTCCTGTTTCTTGATGAACCAACAAGTGGACTTGATAGTGCAGCCTCCTATTATGTCATGAGAAGAATTGCTAACCTTGTTCAGAAAGATGGCATTCAAAGGACTGTTGTTGCATCAATTCATCAACCTAGCAGTGAAGTTTTTGAACTCTTCCATGACCTTTGTCTTCTGTCTTCTGGTGAAACTGTATATTTTGGTCCTGCTTCTGATGCTAATCAGTTTTTTGCTTTGAATGGTTTTCCTTGTCCGACACTCCATAATCCTTCTGATCATTACTTAAGGATCATAAACAAAGATTTTGAACAGGAAGCTGAAGAAGGCTTTGGTAGCAGAGTAACTGCAGAGAAAGCTGATTTTGGTGCAGTAGAAAAGAAGAGGGACCATGCTGCGTTCCTGATTCAGTGCCTTGTTCTTATAAGAAGATCTGCACTGCATTATTTCCGCGACTTAAGCAATTACTGGCTGCGCCTTATTGTGTTTATTGCAATAGCTCTAAGCTTGGGCTCTATCTACTATGATATTGGCTTTGGTGTTGGATCTATTCAGGCCAGAGGATCTCTGCTTGCTTTCTTAAGTTGTCTTTTGTCTTTCATGACACTCGTTGGTGGATTTGCTCCGCTACTAGAGGAAATCAAGGTATTTGAAAGAGAGAGATTGAATGGACACTATGATGTTACAGCATTTCTCATAGGGAACACATTTTCTGCTGTTCCATACATGCTACTAGTAACTCTGGTTCCGGGATTAATATCCTATTACCTTTGTGGATTCCAAAAAGGACCAGAACACTTGGTATACTTTGTATCAGTGCTATTTGCCATAGTTATGTGGGTTGAGAGCCTCATGCTTGTTGTGGGAAGTGTCTCCCCTAACTATGTTATAGGCATGTTGATTTCTGGTGGAATTCAAGGAATCATGACCCTAGTTGGTGGATTCTATAGGTTACCAAATGATCTTCCAAAACCCCTATGGAAATATCCTCTGTATTATGTGTCTTTTCAAAAGTATGGACTCCAAGGATTATTCAAGAATGAATTTGAAGGCTTAACATTTATGATGGGCCAAGATGGAGGTGGTAAGAATAACATAAACATTAGTGGTGGGGAGATTCTAATAAAGACATGGCACGTGGAAATGGGACACTCTAAGTGGGTTGATCTTGGAATCTTTTTTGTAATGATTGTTGTGTATAGAATGCTGTTCTTGGCAATCACTAAGAGCAAGGAGAAGTTGAGGCCTGCATCTATTTGCTGCTTTCACTAG 1788 0.4155 MRRIQGEETEGVTVTWENLWVTVPNGKNTLPILQGLTGYAQPGRLLAIMGPSGCGKTTLLDALSGRLSSNIKQKGNILINGHKQELAYGISGYVTQDDALLSTLTAGETLYYSAQLQFPDSMPVSEKKERADVTLREMGLQNAIHTRVGGWSSKGLSGGQKRRLSICIEILTRPRLLFLDEPTSGLDSAASYYVMRRIANLVQKDGIQRTVVASIHQPSSEVFELFHDLCLLSSGETVYFGPASDANQFFALNGFPCPTLHNPSDHYLRIINKDFEQEAEEGFGSRVTAEKADFGAVEKKRDHAAFLIQCLVLIRRSALHYFRDLSNYWLRLIVFIAIALSLGSIYYDIGFGVGSIQARGSLLAFLSCLLSFMTLVGGFAPLLEEIKVFERERLNGHYDVTAFLIGNTFSAVPYMLLVTLVPGLISYYLCGFQKGPEHLVYFVSVLFAIVMWVESLMLVVGSVSPNYVIGMLISGGIQGIMTLVGGFYRLPNDLPKPLWKYPLYYVSFQKYGLQGLFKNEFEGLTFMMGQDGGGKNNINISGGEILIKTWHVEMGHSKWVDLGIFFVMIVVYRMLFLAITKSKEKLRPASICCFH* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4263 595 Pfam ABC-2 type transporter 216 278 IPR043926 GO:0140359
Ahy13g4263 595 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 293 588 - -
Ahy13g4263 595 ProSitePatterns ABC transporters family signature. 156 170 IPR017871 GO:0005524
Ahy13g4263 595 Gene3D - 12 307 IPR027417 -
Ahy13g4263 595 Pfam ABC-2 type transporter 309 521 IPR013525 GO:0016020|GO:0140359
Ahy13g4263 595 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 293 588 - -
Ahy13g4263 595 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 4 292 - -
Ahy13g4263 595 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 14 259 IPR003439 GO:0005524
Ahy13g4263 595 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 4 292 - -
Ahy13g4263 595 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 252 IPR027417 -
Ahy13g4263 595 CDD ABCG_EPDR 11 241 - -
Ahy13g4263 595 SMART AAA_5 42 235 IPR003593 -
Ahy13g4263 595 Pfam ABC transporter 34 184 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4263 Ahy-Chr13 142190266 142193392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g4263 30 244 Calmodulin-binding Proteins AT2G36910 24.324 5.76e-07 50.8