Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4240 ATGCAGGCCCAATCTAACTTGCAGAAAAGAAAGTCTACATTGATAACGGAAGGGAATGCTGCTGCTTTCAAGAAATCAAGGATGGCAAGCCATGTTGACTCCGTTGAAAGAGAGAGAAAGCAAGATGACTTCATAGAAGAAAAATATGGTGAGGATGAAGATGACGATGATGTTGAAGACAATACTGATGAAATAAAACCAGAGGCAGATGAGGATGCAAATGATGATCATGGAGAGGAAGCAGAGTACTTACTAGGAGATGATGGGGAAACTGCAGAGCAGGGACTTCATGAAGGTCTACTCATAAAAGATGGAGATGAAAACAGCAAGCTTTCTGCTCGACATTTCAGCCATGGATATCACTTGACCGAAGGAAAGTTGAACCACGGAATGGAGGACTACATTTTTGCTCAACACAAGAAGCTCAATGGTTATGACTTGGGTTTGTATGCAATATTTGATGGTCATTCAGGTCATGATGTTGCCAAATACTTGCAAAGCCATCTATTTGAAAACATACTGAATGAGCCTAGTTTCTGGAAGAAACCAGTGCATGCAGTTAAGAAAGTGTGCAAGGCTACAAACGATGAGATCTTAGAGAATATAGCTGATTCGCGGGGAGGATCAACAGTGGTTGCAGCAATACTAATTGATGGAGTGAAGCTGCTTGTAGCCAATGTCGGCGATTCTCGAGCGATATCATGCAAAAATGGTATTGCAAAACCAATCACTGTGGATCACGAACCAGATAAGGAGAAAGATCTTGTTGAAACCAGAGGGGGCTGTGTGTTCACAAGACCAGGATCTATTCCAAGAGTAGATGGCCAATTAGCAATGACAAGAGCATTTGGAGATGGAAAACTGAAGGAGCACATTACTGCTGAGCCAGATGTGATGATTCGGAAGATTGATGATGACACTGACTTCATCATTTTGGCAAGTGATGGTTTGTGGAAGGTGATGACAAATCAGGATGCTTGTGACTGTATCAAAGATGATGTTGATGATGCTAAGAAAGCAGCTAAGAAGTTGGTTAAAGAAGCCAAGTCTCTAGGGAGCTGTGATGATATTTCATGCATAGTTGTTACGTTCTAG 1095 0.4183 MQAQSNLQKRKSTLITEGNAAAFKKSRMASHVDSVERERKQDDFIEEKYGEDEDDDDVEDNTDEIKPEADEDANDDHGEEAEYLLGDDGETAEQGLHEGLLIKDGDENSKLSARHFSHGYHLTEGKLNHGMEDYIFAQHKKLNGYDLGLYAIFDGHSGHDVAKYLQSHLFENILNEPSFWKKPVHAVKKVCKATNDEILENIADSRGGSTVVAAILIDGVKLLVANVGDSRAISCKNGIAKPITVDHEPDKEKDLVETRGGCVFTRPGSIPRVDGQLAMTRAFGDGKLKEHITAEPDVMIRKIDDDTDFIILASDGLWKVMTNQDACDCIKDDVDDAKKAAKKLVKEAKSLGSCDDISCIVVTF* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4240 364 Coils Coil 327 347 - -
Ahy13g4240 364 MobiDBLite consensus disorder prediction 1 15 - -
Ahy13g4240 364 SMART PP2C_4 107 362 IPR001932 -
Ahy13g4240 364 MobiDBLite consensus disorder prediction 47 77 - -
Ahy13g4240 364 SUPERFAMILY PP2C-like 114 364 IPR036457 -
Ahy13g4240 364 Gene3D - 102 364 IPR036457 -
Ahy13g4240 364 MobiDBLite consensus disorder prediction 1 77 - -
Ahy13g4240 364 MobiDBLite consensus disorder prediction 29 46 - -
Ahy13g4240 364 CDD PP2Cc 116 364 IPR001932 -
Ahy13g4240 364 Pfam Protein phosphatase 2C 129 357 IPR001932 -
Ahy13g4240 364 PANTHER ALPHABET, ISOFORM E-RELATED 71 364 - -
Ahy13g4240 364 ProSiteProfiles PPM-type phosphatase domain profile. 117 364 IPR001932 -
Ahy13g4240 364 PANTHER PROTEIN PHOSPHATASE 2C 28-RELATED 71 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4240 Ahy-Chr13 142000775 142003543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g4240 114 364 PP2C-type Phosphatase Gene Family AT3G15260 57.143 1.73e-99 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4240 - - gmx:100814772 489.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4240 13 142000775 142003543 Ahy13g4240 13 142000775 142003543 ECH