Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4231 ATGGAAAAGGAGCCTTTGCTCCCATACTTTAGCCCAAGAAAGAGGCAATCACCATTATCAAACCAGCTTTGTCCATTGCCGGAACATGATGAGGTTCTTCTTCCCGCTTCCCCTGCCTGGATCAAAGACCGACTCATCTTTGGCCCTTCGCCTCTTGGTTCTTCCCCTAGCGATTCTTCACCTTTGATTGAGGCCTTGGCACTTTCACAACCACAACAACCTTCTTCTCCTTGTCCTTCCTCTTCTTCACAGGACTTTGCATCAGCACTTCTTGAATCACCACACTTTAACCAACAACAGCAACAATCTTCTTGGCTTATTGATCCCAATTATCCATGGCGCAAGTCCAATCTTCACCGCTCCAAAACTGCACCGGCTATGGCTGTGATCAGCGATTTCAACAATTGTAGTGCCCCCCAAAAGCCGCAAATTAGTAGCCAGTCAATTATTCATCAGGCTTTTCTCCTTCTTGTTCTTTATTTGGCATTAGGGGTAGTCATTTATTGGTTCAATCGTCATAGTTTTACAGTTTCTGAGACTCATCCCATAGTTGATGCATTGTATTTCTGTATAGTTACAATGTGCACAATTGGATATGGAGACATCACACCAAATAGTACCATAACCAAGCTTTTCGCGATATTCTTTGTGTTGATTGGTTTTGGTTTTATAGACATATTGCTCAGTGGGATGGTTAGCTATGTACTGGATTTGCAGGAGAATCATTTGTTGAGGACAGTGAAGAGTAGGGGCGAAAAGGATGCGAGGTCTTATATAATCGATGTGAAGAAAGGGAGGATGAGAATTAGAATGAAGGTGGCATTGGCAGGACTAGTTGTTGTGTTTTGTATTGGAGTTGGTGTGGCAGTTTTGCATTTTGTGGAGAAGCTCAGCTGGCTGGATTCCTTTTATCTTTCTGTTATGTCAGTTACAACTGTTGGCTACGGCGATCACTCATTCAGTACTATGCATGGTCGCATCTTCGCCGCCATTTGGTTGCTTGTGTCTACACTTGCAGTTGCACGAGCATTCCTATATTTGGCCGAAGCAAGAGTTGATAAGCGACACAGGAGGATGGCAAAGTGGATTCTTGGTCAGGATATGACTGTTGCTGAGTTTCTTGCTGCAGATATGGACAACAATGGTTTTGTGAGTAAATCTGAATATGTTATATACAAGCTCAAGGAGATGGGAAAAGTATCGGAGAAGGACATTATGCAGATCAGTGAGAAGTTCGATAGACTGGATACTGGGAATTGTGGAAAAATAACACTTGCTGATCTCATGGATGCTCGAAATTGA 1302 0.4309 MEKEPLLPYFSPRKRQSPLSNQLCPLPEHDEVLLPASPAWIKDRLIFGPSPLGSSPSDSSPLIEALALSQPQQPSSPCPSSSSQDFASALLESPHFNQQQQQSSWLIDPNYPWRKSNLHRSKTAPAMAVISDFNNCSAPQKPQISSQSIIHQAFLLLVLYLALGVVIYWFNRHSFTVSETHPIVDALYFCIVTMCTIGYGDITPNSTITKLFAIFFVLIGFGFIDILLSGMVSYVLDLQENHLLRTVKSRGEKDARSYIIDVKKGRMRIRMKVALAGLVVVFCIGVGVAVLHFVEKLSWLDSFYLSVMSVTTVGYGDHSFSTMHGRIFAAIWLLVSTLAVARAFLYLAEARVDKRHRRMAKWILGQDMTVAEFLAADMDNNGFVSKSEYVIYKLKEMGKVSEKDIMQISEKFDRLDTGNCGKITLADLMDARN* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4231 433 Gene3D - 340 433 - -
Ahy13g4231 433 PRINTS Two pore domain K+ channel signature 192 220 IPR003280 GO:0005267|GO:0016020|GO:0071805
Ahy13g4231 433 PRINTS Two pore domain K+ channel signature 311 320 IPR003280 GO:0005267|GO:0016020|GO:0071805
Ahy13g4231 433 SUPERFAMILY EF-hand 368 430 IPR011992 -
Ahy13g4231 433 SUPERFAMILY Voltage-gated potassium channels 263 370 - -
Ahy13g4231 433 PANTHER TWO-PORE POTASSIUM CHANNEL 3 98 428 - -
Ahy13g4231 433 Pfam Ion channel 278 348 IPR013099 -
Ahy13g4231 433 Pfam Ion channel 156 235 IPR013099 -
Ahy13g4231 433 Gene3D - 146 248 - -
Ahy13g4231 433 ProSitePatterns EF-hand calcium-binding domain. 377 389 IPR018247 -
Ahy13g4231 433 Gene3D - 278 339 - -
Ahy13g4231 433 SUPERFAMILY Voltage-gated potassium channels 146 235 - -
Ahy13g4231 433 MobiDBLite consensus disorder prediction 1 23 - -
Ahy13g4231 433 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 98 428 IPR003280 GO:0005267|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4231 Ahy-Chr13 141922269 141926704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g4231 4 431 Ion Channels AT4G18160 58.716 1.16e-172 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4231 K05389 - gmx:100804249 647.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4231 13 141922269 141926704 Ahy13g4231 13 141922269 141926704 ECH