Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4229 ATGTCTGATGAAGCTAAACAACTTCTCTACCAAGACCTTATTCTTGATCATCATCAGAATCAGAATATTATTGCAGGAGGAGGAAGATTATCCAACAACATGTTCTGTGAGAAGCAGTTTCCATCATCATCATCATCATCACAAGTAGCGTTTGATCCATCTTCATACATGAGCTTCACTGAATGCCTTCAAGGAGGGATGGACTATAACTCGCTTGCAACTTCTTTTGGTTTGTCTCCTTCTTCATCGGAGGTCTTTTCATCCATCGAAGGCAACAATAATAATCAAAAGCTCGAAGGTGATGTATTAGGAACTGGTGGCGGTGGTGGAGGTAGTGAAACCCTTGCAACCCTGAACTCATCGATCTCTTCGTCATCATCTGAAGCCGGGGGCGAAGAAGATTCTGGAAAGAGCAACAAAGATAGCCAGGTCAAAGAAGAAGCAGCAGGAGAAACCTCTAAGAAGGGGAACAAGGAGAATAATAATAACAAGAAGAAAGGGGAGAAGAAGCAGAAGGAGCCAAGGTTTGCGTTCATGACAAAGAGCGAGGTTGATCATCTTGAAGATGGATACCGATGGAGAAAATACGGACAGAAAGCCGTTAAGAATAGCCCTTATCCAAGGAGTTACTACAGATGCACGACACAGAAGTGCAGCGTGAAGAAACGCGTGGAGAGGTGTTATCAGGATCCAACGACTGTGATAACAACCTATGAAGGTCAACACAACCATCCAGTCCCCACTTCTTTGAGAGGGAATGCGGCTTCAATGTTCACACCTTCCATGCTCTCCATCTCCGCCCCCACTCCCCTCCTCTCATCCGCCGCACATCACGACCTCGCCCTTTTTGCTCCCCTTTCCCACCACCACAACCAATATTCCGCTGCTTCTGGATCATTGTTTCATCACCATCAGAGCATTAACAACAACTTTAATAACAACAACAATAATAATAATAATAACTCTCTTCTTCTTCTCAATCATCATCATCATCCGTATAATAATCAGCAGCTTCCTCCTGAATATGGCCTCCTTCAAGACATGCTCCCTTCCATGTTCCTCAAGCAAGAGCCATGA 1077 0.4448 MSDEAKQLLYQDLILDHHQNQNIIAGGGRLSNNMFCEKQFPSSSSSSQVAFDPSSYMSFTECLQGGMDYNSLATSFGLSPSSSEVFSSIEGNNNNQKLEGDVLGTGGGGGGSETLATLNSSISSSSSEAGGEEDSGKSNKDSQVKEEAAGETSKKGNKENNNNKKKGEKKQKEPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCSVKKRVERCYQDPTTVITTYEGQHNHPVPTSLRGNAASMFTPSMLSISAPTPLLSSAAHHDLALFAPLSHHHNQYSAASGSLFHHHQSINNNFNNNNNNNNNNSLLLLNHHHHPYNNQQLPPEYGLLQDMLPSMFLKQEP* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4229 358 Gene3D WRKY domain 171 248 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy13g4229 358 SUPERFAMILY WRKY DNA-binding domain 179 247 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy13g4229 358 Pfam WRKY DNA -binding domain 188 245 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy13g4229 358 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 311 IPR044810 GO:0003700
Ahy13g4229 358 PANTHER WRKY TRANSCRIPTION FACTOR 81 1 311 - -
Ahy13g4229 358 MobiDBLite consensus disorder prediction 112 132 - -
Ahy13g4229 358 ProSiteProfiles WRKY domain profile. 182 247 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy13g4229 358 SMART WRKY_cls 187 246 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy13g4229 358 MobiDBLite consensus disorder prediction 133 175 - -
Ahy13g4229 358 MobiDBLite consensus disorder prediction 83 175 - -
Ahy13g4229 358 MobiDBLite consensus disorder prediction 83 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4229 Ahy-Chr13 141891110 141892930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g4229 47 358 WRKY Transcription Factor Family AT4G18170 47.352 4.90e-74 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy13g4229 WRKY 7.10E-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4229 - - gmx:100816891 352.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4229 13 141891110 141892930 Ahy13g4229 13 141891110 141892930 ECH
Ahy13g4229 13 141891110 141892930 Ahy3g3961 3 138909755 138911497 hybridization