Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4217 ATGGCTTCAGTTTCCGGCAACATGAAGGGTTTCTACAGGCAGAAGAAAAGCAACACCAAATCTTCCAAAAAAGCCTCTGCCAAGTCAGGTGCAGCCCAACCTACCGCTCTCGTCTCTCACGGAGGCAAACTTGATCTTCAAGATGATTACAGTGCATGCGAGGCAATGCTGCGGCAATTCGACATGAACATGGCGTATGGCCCTTGCGCTGGGATGACAAGGACGGCACGGTGGGAGCGTGCGCAGAAGCTTGGTCTTAACCCTCCACAGGAAATCGAGAAGCTCTTGAAGAGTGGCAAGGTTCAGAACGAGTCCTTGTGGGATGGTCGCATTTAG 336 0.5208 MASVSGNMKGFYRQKKSNTKSSKKASAKSGAAQPTALVSHGGKLDLQDDYSACEAMLRQFDMNMAYGPCAGMTRTARWERAQKLGLNPPQEIEKLLKSGKVQNESLWDGRI* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4217 111 Pfam DNA polymerase delta, subunit 4 47 102 IPR007218 GO:0000731|GO:0006260
Ahy13g4217 111 MobiDBLite consensus disorder prediction 1 38 - -
Ahy13g4217 111 PANTHER DNA POLYMERASE DELTA SUBUNIT 4 1 110 IPR007218 GO:0000731|GO:0006260
Ahy13g4217 111 MobiDBLite consensus disorder prediction 1 15 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4217 Ahy-Chr13 141767289 141768154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g4217 1 111 Core DNA Replication Machinery Family AT1G09815 56.000 2.83e-45 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4217 K03505 - gmx:100778329 158.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4217 13 141767289 141768154 Ahy3g3946 3 138818446 138819350 hybridization