Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4216 ATGGATGAACAAAATGTCGGAACGTCGGGTTTCATCACAGTGGACTCTATATGCACCTCCTGTATCAAACTACGATTTTCCATACCAGGCTTAGTGCTTGCGAGATTGGATAACACATCGACACGAATTGAGGTGTCCAAGATGCATTTGGAAAGTGGGGATGTTGGGACACCAAAAGGGGCATTGGAAGAAGCTAAGGCGTTGAATTCAAGGATGAAGCATAGTGGGAACCTAAGCAGCAAAGATATGTTGTTTAAAGCTGATAAGATTGATCTCAAGAGTTTGGATGATGAGCTAGAAAAGCACCTTACAAGGATTCTATCTAGACATATTGATGCCAAAAGGCCTAAAGAAGAGTGGGAGATTTATTTGGTAAAACTAAATTTGCAACATGTTGTGGTAAATGGGGCCTATGGCACTGTCTATAAGGGCACCTATGATGGCCAAGATGTTGCAGTGAAAGTGTTGGATTGGGGTGAGGATGGTGGTGCTTCTGCAGCTTCCTTAAGAGCATCATTCCAGCAGGAGGTTACTGTTTGGCAAAAACTTGATCATCCAAATGTTACTGATGGTTATCAGTGGCTAAGTGAATGGGGGAGGGTTGAATCTTAG 612 0.4297 MDEQNVGTSGFITVDSICTSCIKLRFSIPGLVLARLDNTSTRIEVSKMHLESGDVGTPKGALEEAKALNSRMKHSGNLSSKDMLFKADKIDLKSLDDELEKHLTRILSRHIDAKRPKEEWEIYLVKLNLQHVVVNGAYGTVYKGTYDGQDVAVKVLDWGEDGGASAASLRASFQQEVTVWQKLDHPNVTDGYQWLSEWGRVES* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4216 203 ProSiteProfiles Protein kinase domain profile. 127 203 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g4216 203 PANTHER KINASE ATMRK1, PUTATIVE-RELATED 68 189 - -
Ahy13g4216 203 SUPERFAMILY Protein kinase-like (PK-like) 114 197 IPR011009 -
Ahy13g4216 203 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 68 189 - -
Ahy13g4216 203 Gene3D Phosphorylase Kinase; domain 1 119 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4216 Ahy-Chr13 141757593 141760012 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g4216 76 189 MAP Kinase Kinase Kinase AT3G22750 68.644 1.41e-50 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Ahy13g4216 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4216 - - ahf:112735622 410.994