Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4204 ATGGATCATTATACTCTAGGTGGAGTTATGGAGAATAATAATAATAATAACAACAAGGAGAAGTACTATCAAGGTGATTTGAGTGACATAATCCGTGCTAGTTATGGTTATTATGGGAGCTACAACTCAGCATCATCTGAAGCTTCTTACATGGTGGAAGACCCTCCTATGATGGCAAACTTTGGTGATCCTTTCTCAAACTCGGGAGGAGATCCCTTGCTACATGATATGCCCTACTTTAACACTTTATCTTTGGGACTGGAAGCTGCTACTTGTTTTGGTGGTAGCAGCAGTGGTGATGCTTGTGATGATGATGATGATGATATGAAAACGCCTTGTATCATGACTCATCATCAGATCTCTCATCCCAACCCCAATTTATTATTACCCATCTCAACGTGTCAAGATTCTTCCTCCACAATAATGACAGTTAATAATAATAGCAGTACCAAGCCTTCTTCTGCTTATTGCTTGGTGGACAACACAGGACCGGTGGTAGTGCAGATCTCAGCTCCTGTTAATAAGCGAAGGAAAAGTCAGGCAAAGAAGTCGATTTGTATTCCAGCAGCAGCAGCACCAACCAGTAGACAAGGTGGAGAGGTAGTTCCCTCTGATCTGTGGGCTTGGAGAAAATACGGTCAAAAACCTATTAAAGGTTCTCCATATCCAAGGGGTTACTATAGATGCAGCAGCACAAAGGGTTGCCCTGCAAGGAAACAAGTGGAGAGGAGCAGAACAGACCCAAACATGTTGGTCATTACTTACACTTCCGAACACAACCATTCATGGCCAACTCAAAGAAACGCTTTGGCTGGTTCATCCCGATCCAATACTCATCCACCATCATCGTCCACTAAGAACACAATCACAACAACAAAGCCAGAAGAGCAACAACACAGCAACACTGACAGCAACACTGCGTTACTCGCAGTGAAGAAGGAAGACATTCATAATAATAACAAACTTGAGGACTTGTTTGCAGAATTGGGACAATTGGAACGTGATTATATATGCTGA 1017 0.4258 MDHYTLGGVMENNNNNNNKEKYYQGDLSDIIRASYGYYGSYNSASSEASYMVEDPPMMANFGDPFSNSGGDPLLHDMPYFNTLSLGLEAATCFGGSSSGDACDDDDDDMKTPCIMTHHQISHPNPNLLLPISTCQDSSSTIMTVNNNSSTKPSSAYCLVDNTGPVVVQISAPVNKRRKSQAKKSICIPAAAAPTSRQGGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSTKGCPARKQVERSRTDPNMLVITYTSEHNHSWPTQRNALAGSSRSNTHPPSSSTKNTITTTKPEEQQHSNTDSNTALLAVKKEDIHNNNKLEDLFAELGQLERDYIC* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4204 338 SUPERFAMILY WRKY DNA-binding domain 202 264 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy13g4204 338 ProSiteProfiles WRKY domain profile. 198 264 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy13g4204 338 MobiDBLite consensus disorder prediction 261 304 - -
Ahy13g4204 338 SMART WRKY_cls 203 263 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy13g4204 338 Gene3D WRKY domain 177 257 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy13g4204 338 Pfam WRKY DNA -binding domain 205 261 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy13g4204 338 PANTHER WRKY TRANSCRIPTION FACTOR 14-RELATED 24 317 - -
Ahy13g4204 338 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 24 317 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4204 Ahy-Chr13 141622731 141625021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g4204 23 337 WRKY Transcription Factor Family AT1G30650 39.108 2.75e-65 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy13g4204 WRKY 1.20E-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4204 - - aip:107634728 639.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4204 13 141622731 141625021 Ahy3g3935 3 138701412 138703788 hybridization