Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4199 ATGGAGTCCATCTGGAAGATCAGAAGCAAGACCAGCAGCAACAGGAAGCCCAGGCTAGAGCGCCTCAACGCCAGAAAGAACATCAATTACAATCCACCCGCAAATCCTCATTCGCCACCTTCTTCCTCCTCCTCTTCCTCTTCTCTCCACCACCAAACTAGCTTTAGGGTCACCGACGGCGATTTCGACCTAATCTTCCAAAGCCTGGGCCTTTCTGGCCCCGAAGATTTTTCCATCCCAACTGCAGATTGGGAAGCCAGGAAGGTTCGCTTTGCTTCTCATACTTCTAATGCTGCCGCTGAGCCCAAGGAGGATCGAAATTCAGCTGAAGTGAAATCTGGGGTTTTTCTTGATTCGGATTCCCAGCTTAAAAATGACAACTTTTCGAGACCCGTTGAAGTGGGAGGCTCCAAGTTTGGTGTTTCTTCAGATGTGAAGGTTTTGGGTGGTAAAAATGGAGATGGGGCTGGCGGGGGAGGGATCAAGGGTGCCAGGCCTCCGCTCTTGAGGCCAATTGTTGTTGATGCGGTTGGTTCGAATTGGGAATTAAAGAGGTCCTTTGGTCTCCAAGATAATTTTGTTGGTATTGGAGTTGTTGGTGATTCGCCTTCGTCTTCTGGTGAAATCGGCGTTGTTGGTAGGGTGAGAAATGGGGAAAGAAGCATGCTTTTTACGGATTCAGGTTCCTTTACTACATCCCATGATGATGATAGTGATATTGGCGGGGAAAGAGCTTGTCCTTGTTCTGGTTCTGGCGCGGTTGATGGTTCCTTAATTGAGTGGTTTAACCGAACTTTCTCGTCGTGGCAAAAAGGTTACGTTTTGGGAAAGGGGTCGTTTGGAACCGTCTATGAAGGTTTTACAGATGATGGATTCTTTTTTGCGGTGAAGGAGGCATCTTTGCTGGATGAAGGTAGTAACCAGGGTAAACAGAGCGTATTCCAACTTCGGCAGGAAATATCTCTTTTGAGTCGGTTTCAACACGAGAATATAGTTCGATATTTTGGCACTCAAGAGGACCAAAGTTCACTTTATATCTTCCTTGAACTTGTGCCTAAAGGGTCATTGTTAAGTCTCTATCAGAAGTATAGCTTAAATGATTCTCACGTTTCTGCATACACAAGGCAGATTTTGCATGGCTTGAAATATCTTCACAATCAAAATGTGATTCACAGGGATATCAAGTGTGCCAATATCCTGGTTGATGTAAGCGGGTCAGTCAAGCTTGCGGATTTTGGGTTGGCAAAGGCAACTGAAAATGTTAAATCAAGCAAAGGATCCCCATACTGGATGGCCCCAGAGGTTGTTAACTTGAAAAATGATGGGTATGGACTAGCAGCTGATATATGGAGCTTAGGTTGTACAGTCTTGGAGATGTTGATAGGGAAACGTCCTTACTCTGATTTGGAAGGAATGCAAGCATTATTTCGAATTGGGAGAGGAGAACCTCCGCCTATTCCTGAAACATTGTCGAAGGATGCCAGGGATTTTATCCTTGAGTGCTTACAAGTTAACCCAAGTAAACGGCCAACTGCAGCTCAGTTATTGGAACATCCATTTCTAAGGAGACCATTTCTTTCTTCCTATTCCACTGCGTCGCCACATATTAAAACCTTTAAGAGCTTATAG 1629 0.4518 MESIWKIRSKTSSNRKPRLERLNARKNINYNPPANPHSPPSSSSSSSSLHHQTSFRVTDGDFDLIFQSLGLSGPEDFSIPTADWEARKVRFASHTSNAAAEPKEDRNSAEVKSGVFLDSDSQLKNDNFSRPVEVGGSKFGVSSDVKVLGGKNGDGAGGGGIKGARPPLLRPIVVDAVGSNWELKRSFGLQDNFVGIGVVGDSPSSSGEIGVVGRVRNGERSMLFTDSGSFTTSHDDDSDIGGERACPCSGSGAVDGSLIEWFNRTFSSWQKGYVLGKGSFGTVYEGFTDDGFFFAVKEASLLDEGSNQGKQSVFQLRQEISLLSRFQHENIVRYFGTQEDQSSLYIFLELVPKGSLLSLYQKYSLNDSHVSAYTRQILHGLKYLHNQNVIHRDIKCANILVDVSGSVKLADFGLAKATENVKSSKGSPYWMAPEVVNLKNDGYGLAADIWSLGCTVLEMLIGKRPYSDLEGMQALFRIGRGEPPPIPETLSKDARDFILECLQVNPSKRPTAAQLLEHPFLRRPFLSSYSTASPHIKTFKSL* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4199 542 Pfam Protein kinase domain 271 521 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g4199 542 ProSitePatterns Protein kinases ATP-binding region signature. 275 297 IPR017441 GO:0005524
Ahy13g4199 542 SUPERFAMILY Protein kinase-like (PK-like) 262 532 IPR011009 -
Ahy13g4199 542 ProSiteProfiles Protein kinase domain profile. 269 521 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g4199 542 Gene3D Transferase(Phosphotransferase) domain 1 267 539 - -
Ahy13g4199 542 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 158 523 - -
Ahy13g4199 542 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 14 106 - -
Ahy13g4199 542 ProSitePatterns Serine/Threonine protein kinases active-site signature. 389 401 IPR008271 GO:0004672|GO:0006468
Ahy13g4199 542 MobiDBLite consensus disorder prediction 1 53 - -
Ahy13g4199 542 SMART serkin_6 269 521 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g4199 542 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 158 523 - -
Ahy13g4199 542 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 14 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4199 Ahy-Chr13 141478400 141508016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g4199 18 525 MAP Kinase Kinase Kinase AT4G08500 44.732 1.07e-132 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Ahy13g4199 Pkinase 3.10E-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4199 K13414 - aip:107631583 1009.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4199 13 141478400 141508016 Ahy3g3928 3 138628340 138632598 hybridization
Ahy13g4199 13 141478400 141508016 Ahy20g0865 20 11120549 11123244 PCT
Ahy13g4199 13 141478400 141508016 Ahy10g0599 10 6001191 6003862 PCT