Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4198 ATGTCTTCCAAAGGAAAAGAACCCCAAAACATGATGGATATTGATCTCTCTTTGAAGATAGATCATCATGAAAATAATAAAGACGGAGAAGCAACACCACCAAAGGTAGTAGCAACAGTCAAAGAGGATCTCAAGAACAAGAAGAAGGAAGAAATAAAGGCACTTAATATTAACAAAGAAGAGGTTCCTGAAGCCGCAGCTGGCGAAATTGAAGATGAATTACCTTCGCAGGATAACACAAAAGCAAGAGAGTTGAGTGTGTTACAAATGGAGATGGAGAGCATGAAAGAGGAAAACAAAGTGCTGAGGAAAGTGGTGGAACAAACTATGAAAGACTACTATGATCTGCAACTCAAATTTTCAATCATCCAAGAAAACAACAATAATAAAGATAAAAGCAAGGATCATGAAATTTCTCTCTCACTTCACGATCATCATCATCGAGAAGAGAATGCAACGATAAGGAAGCTCAATGATGAAGAAGGGCCGCGGAGAATTCATCATTATCAAGATGAGATGTTTAAGTTTAACAACAAAATTGAAAAAGCCTCATCCCTTGCAAACACCGATTGCGGTGACAGTTTAATAAGCGAGAGTGAATTAGGCTTATCGCTAAGGTTGGAGACAAGCACAAGAAAAAAGGAAAAGGAAATTGATGACGAGGAAGATCAAAAGCAAGAAGAAGAAGAGGAAGAAGAAGAGGAAGAAGAGGAGGAGAAAAAGACGCAACCTGCAAATTTTGCATCATCGTCAGCGGCTACGAAATTGCAGCGGACACAACATCATGCGTTCCACGCTGCGTCGCCTCCTAACAGAAAAGCTAGGGTTTCGGTTAGAGCAAGATGCGAGGCAGCCAACATGAATGATGGGTGCCAATGGAGAAAATACGGACAGAAGATTGCTAAAGGAAATCCATGTCCACGAGCTTACTATCGTTGCACTGTAGCCCCTGGCTGCCCCGTTAGGAAACAGGTACAGAGATGCATAGATGACATGTCAATACTAATCACAACATACGAAGGAACGCACAACCATCCACTTCCGGTGGGTGCAACTGCCATGGCTTCTTCGGCCGCAGCTTCCTTCATGTTGCTGGACTCAAGCACTTTCTCAGATCATGGCAGCTTCAACGTTAACCACCACCAGCCATTACTACTAAACCCAAACCCTAATAATAAAGGAGTTGTTCTGGACCTGATCGCCAATGAGGCATCATCATCACTACGTTTTCCCGGTATGTCTTGGATGCAAAACAATAATCATAATGGCGGTGCAGGTAGCTTTCATCATCAGAAGGCGGCTGCTAGTAGAGGGATAATAATGGAGCATGGCGAAGAAAGCAAGGCAGTAGTAGATGACATGGTGAAGGTGTCGGCCATTGCGTCAGATCCTAAGTTTAGGGTTGCTGTTGCGGCGGCCATAACATCATTCATCAATAACAATAATAAAGATCATGCTATTGGAGCCACTTCTTTTGCCGCTAATAGCAGCAGCAGCAGCAGGACTACTGCCAACAACTGGATCTTAGATAATAATCATAATTCTCTCTCTAAAGATGCTAATCCATAA 1569 0.427 MSSKGKEPQNMMDIDLSLKIDHHENNKDGEATPPKVVATVKEDLKNKKKEEIKALNINKEEVPEAAAGEIEDELPSQDNTKARELSVLQMEMESMKEENKVLRKVVEQTMKDYYDLQLKFSIIQENNNNKDKSKDHEISLSLHDHHHREENATIRKLNDEEGPRRIHHYQDEMFKFNNKIEKASSLANTDCGDSLISESELGLSLRLETSTRKKEKEIDDEEDQKQEEEEEEEEEEEEEKKTQPANFASSSAATKLQRTQHHAFHAASPPNRKARVSVRARCEAANMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCIDDMSILITTYEGTHNHPLPVGATAMASSAAASFMLLDSSTFSDHGSFNVNHHQPLLLNPNPNNKGVVLDLIANEASSSLRFPGMSWMQNNNHNGGAGSFHHQKAAASRGIIMEHGEESKAVVDDMVKVSAIASDPKFRVAVAAAITSFINNNNKDHAIGATSFAANSSSSSRTTANNWILDNNHNSLSKDANP* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4198 522 SMART WRKY_cls 287 347 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy13g4198 522 MobiDBLite consensus disorder prediction 494 522 - -
Ahy13g4198 522 Coils Coil 41 61 - -
Ahy13g4198 522 MobiDBLite consensus disorder prediction 221 239 - -
Ahy13g4198 522 Pfam WRKY DNA -binding domain 288 346 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy13g4198 522 MobiDBLite consensus disorder prediction 141 163 - -
Ahy13g4198 522 MobiDBLite consensus disorder prediction 16 30 - -
Ahy13g4198 522 ProSiteProfiles WRKY domain profile. 282 348 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy13g4198 522 MobiDBLite consensus disorder prediction 210 275 - -
Ahy13g4198 522 Coils Coil 211 243 - -
Ahy13g4198 522 MobiDBLite consensus disorder prediction 244 258 - -
Ahy13g4198 522 Coils Coil 85 112 - -
Ahy13g4198 522 MobiDBLite consensus disorder prediction 1 34 - -
Ahy13g4198 522 Gene3D WRKY domain 272 349 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy13g4198 522 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 13 509 IPR044810 GO:0003700
Ahy13g4198 522 PANTHER WRKY TRANSCRIPTION FACTOR 9-RELATED 13 509 - -
Ahy13g4198 522 SUPERFAMILY WRKY DNA-binding domain 281 348 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4198 Ahy-Chr13 141462111 141464588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g4198 88 376 WRKY Transcription Factor Family AT1G68150 48.621 1.60e-77 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy13g4198 WRKY 1.80E-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4198 - - aip:107631585 948.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4198 13 141462111 141464588 Ahy13g4198 13 141462111 141464588 ECH
Ahy13g4198 13 141462111 141464588 Ahy3g3927 3 138616730 138619093 hybridization