Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4183 ATGATTCATGAGTGGTGGATGGTGTTGTTGCAAGGGTTGAAGCCAATAATGCTCATGGTGTTGGTGCAGATAACATTTGTGGTGGTGAATGTGTTGTACAAGATGGCCATTAATGATGGAATGAGCATGAGAGTTGCTACTGCTTATCGCCTCATCTTTGCTTCCGCCTTCACTCTCCCCGTTGCTCTCATTTTTGATACCAACAACAACAATAAACCCAAGATTACTCCAAGGGTGCTTCTTTTGGAATTTCTTTGTGGATTATTTGGGGGAACTTTATTTCTGAACTTTTACTTCGCGGCATTGGCTTTGATGCCAGCAACGTTTGTGTTGGCCATCCTTAATCTTTGTCCAGCTGTCACCTTCATCATGGCCATAACCTCAGGTTTGGAAAAGTTGAATTTGGGAGCAGCAGCAGGGAAGGCCAAAGTAATAGGAACAATAACCGGAATCAGTGGTGCAATGGTGTTGACGTTTTACAAAGGCAAACAAATTGATACATGGTCTTCTTCTTCCCGTATCAACCTCTTGCATCATGTACATGGCCGTGATTATGGTAACAAATTCTTGGGTTTTTCATATGCAACTGCAAGCTGCTGCTCTTTTGCATTGTGGCTCAACATTCAGGCTAAGTTGAATCAAGAATTCCCCAGGCACCACACAGGCACAGCTCTTATGTGCACTATGGCCGCATTACAATCCACTCTCTTTGCTCTCTCTCTTGATAGGGATTGGGCCTCCCAATGGAAGCTTGCTTGGAATATCAGGCTCCTCACTGTCGCTTATTCGGGAATTGTGACGTCTGGAATTGTGGTTAATATTATTGCATGGTGCGTGCATATGAGAGGCCCTCTATTTTGCTCTGTTTTCAATCCTCTGCAGCTTGTGCTTGTGGCCATAGCTGCTTCCTTCTTGTTGAATGAGAATTTATATTTAGGAAGTGTGATTGGAGGAGTGTTGATAGTGATTGGGCTATACACAGTGCTTTGGGGGAACAGCAGAGAAACCAAACACAAGATTCAGATTCACACTCAGTTATCAGAAGAAATCACAAGAGATCCTCTTCAAGTTATTGTTATGTCCCCGCAGAAACAACAACAAAACTCATCATCAAATTCAGAATTGCCCTCCTCATAA 1137 0.4318 MIHEWWMVLLQGLKPIMLMVLVQITFVVVNVLYKMAINDGMSMRVATAYRLIFASAFTLPVALIFDTNNNNKPKITPRVLLLEFLCGLFGGTLFLNFYFAALALMPATFVLAILNLCPAVTFIMAITSGLEKLNLGAAAGKAKVIGTITGISGAMVLTFYKGKQIDTWSSSSRINLLHHVHGRDYGNKFLGFSYATASCCSFALWLNIQAKLNQEFPRHHTGTALMCTMAALQSTLFALSLDRDWASQWKLAWNIRLLTVAYSGIVTSGIVVNIIAWCVHMRGPLFCSVFNPLQLVLVAIAASFLLNENLYLGSVIGGVLIVIGLYTVLWGNSRETKHKIQIHTQLSEEITRDPLQVIVMSPQKQQQNSSSNSELPSS* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4183 378 Pfam EamA-like transporter family 191 329 IPR000620 GO:0016020|GO:0016021
Ahy13g4183 378 Pfam EamA-like transporter family 14 157 IPR000620 GO:0016020|GO:0016021
Ahy13g4183 378 SUPERFAMILY Multidrug resistance efflux transporter EmrE 244 334 - -
Ahy13g4183 378 PANTHER MTN21/EAMA-LIKE TRANSPORTER FAMILY PROTEIN, PUTATIVE-RELATED 13 343 - -
Ahy13g4183 378 PANTHER WAT1-RELATED PROTEIN 13 343 IPR030184 GO:0016021|GO:0022857
Ahy13g4183 378 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4183 Ahy-Chr13 141314614 141316757 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g4183 13 376 Nodulin-like Gene Family AT1G25270 38.753 1.64e-78 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4183 - - gmx:100803545 369.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4183 13 141314614 141316757 Ahy20g0852 20 10990340 10992192 PCT
Ahy13g4183 13 141314614 141316757 Ahy10g0583 10 5822967 5824882 PCT