Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4182 ATGGAAGGGTTGAAACCAGTGATACTAATGGTGTTACTACAGATATTATATGCAGCGCTGAACGTGTTGTATAAGCTCGCTATATTTGATGGAATGAGCATGAGAGTGGCTTCTGCTTACCGTCTCATCTTTGCATCTGCTTTTACTCTCCCACTTGCTCTCTTCTTTGATAGGAACAACCCACCAAGAATTACCAGCAAGGTGCTTTTTATGGAATGTCTTTGTGGATTTTTCGGCGGAAGTTTATTTCTCAACCTTTATTTTGCCGCCCTGTCTCTGTTGCCCGCGACGTTCATGTTGGCCATCAACAACCTTGCTCCGGCTGTCACCTTTGTTATGGCCATAATTTTCCGTTTGGAAAAACTGAACTTGGGATCCGCAGCGGGAAAAGCGAAGGTACTAGGAACAGTAACTGGAATTACAGGGGCAATGGTGTTAAGCTTTTTCAGAGGTGTTGAAATTGATATTTGGTCCACACACATAGATCTCTTGCATCGTAATCATCCTCCACCACATGGTGAATATGCCAACAAACTCTTGGGTCTCACATATGCCATAGCAAGCTGCTGCTCCTTTTCTCTCTGGCTCAACATTCAGGGTAAAATGAATGGTAAAGAATACCCAAGGCATCACACAGGGACAGCATTGATGTCCACAATGGGCGCAATACAGGCGACTGTTTTTGCTCTTTGTGTTGATAGGGATTGGACCCAATGGCGCCTTGGTTGGAACATAAGGCTTCTCACTGTGGCTTACGCGGGAATCGTAGCATCAGGTATAGTGATTATTATTACTGCGTGGTGCATAAAAGTGAGAGGCCCTCTATTTGCGTCTATTTTCAATCCTCTACAGCTTCTGCTTGTGGCTATTGTTGCTTCTTTGATTCTCAATGAGAATTTATATTTAGGAAGTGTGGTTGGAGGAGTGGTGATTGTGATTGGCTTGTACACGGTGCTATGGGGAAAGAGCAAAGAAATTGAAGAGAAGCAGAGGATGGATGAGTTAATGAATAATAATAAAGGGTCCCAAGTTGTTGATGTTGATGTTGTTGTTAGGTCTCCGCAAATAGATGATCATCAAAGTGAACAACACAACAATATATAG 1104 0.4303 MEGLKPVILMVLLQILYAALNVLYKLAIFDGMSMRVASAYRLIFASAFTLPLALFFDRNNPPRITSKVLFMECLCGFFGGSLFLNLYFAALSLLPATFMLAINNLAPAVTFVMAIIFRLEKLNLGSAAGKAKVLGTVTGITGAMVLSFFRGVEIDIWSTHIDLLHRNHPPPHGEYANKLLGLTYAIASCCSFSLWLNIQGKMNGKEYPRHHTGTALMSTMGAIQATVFALCVDRDWTQWRLGWNIRLLTVAYAGIVASGIVIIITAWCIKVRGPLFASIFNPLQLLLVAIVASLILNENLYLGSVVGGVVIVIGLYTVLWGKSKEIEEKQRMDELMNNNKGSQVVDVDVVVRSPQIDDHQSEQHNNI* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4182 367 SUPERFAMILY Multidrug resistance efflux transporter EmrE 238 324 - -
Ahy13g4182 367 PANTHER WAT1-RELATED PROTEIN 7 339 IPR030184 GO:0016021|GO:0022857
Ahy13g4182 367 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 146 - -
Ahy13g4182 367 PANTHER MTN21/EAMA-LIKE TRANSPORTER FAMILY PROTEIN, PUTATIVE-RELATED 7 339 - -
Ahy13g4182 367 Pfam EamA-like transporter family 180 319 IPR000620 GO:0016020|GO:0016021
Ahy13g4182 367 Pfam EamA-like transporter family 5 147 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4182 Ahy-Chr13 141308336 141311035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g4182 4 347 Nodulin-like Gene Family AT1G25270 40.000 8.01e-93 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4182 - - gmx:100809587 408.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4182 13 141308336 141311035 Ahy3g3905 3 138413145 138415365 hybridization
Ahy20g0851 20 10965498 10970258 Ahy13g4182 13 141308336 141311035 PCT
Ahy10g0582 10 5807540 5814390 Ahy13g4182 13 141308336 141311035 PCT