Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4178 ATGGCTTCTAATGCAGCTTGTGTTAATAATTTGGTAGCAGGAGAAGTAGTTGTTGCAGCTAAGATGAGCGAAGAAGATGGCAATAATAACGTTGACTACTCACAAAGGGGTCAATGGCTTCGAGCAGCAGTTCTAGGAGCCAATGATGGGTTGGTCTCAGTTGCATCATTGATGATGGGTGTAGGAGCTGTTAAGAGAGACTCCAAAGCCATGTTACTTGCTGGCTTAGTGGGATGCATTGCAGGAGCATGTAGCATGGCACTGGGTGAATATGTTTCGGTTTCAACTCAGTATGAAGTTGAAGTTGCTCAAATCAAAAGGGACATGATGATGATGATGGAGAACAAGAATGAGATGGAGAAAAAGAGGAGGTCATTGCTCCCTAACCCTTTGCATGCTGCTTTGGCATCAGCATTGTCATTTACTGTAGGTGCAGTCATTCCTTTGGTTTTCACTGCATTTGTGAGAGACTACAGGTTAAGGCTTGGGTTGTGTGTGGTGGTGTCTAGCTTGTTTTTGGTGGGGTTTGGATGCTTGGGTGCTGAGTTGGGACACACACATAACGTTAAGTCCTCTATCAGGATCCTTATTGGGGGCTTGTTGGCTATGGCTATCACTTTTGGGTTAACCAAATTAGTAGGCTTTAGTGCTAATTTGGAATTGTGA 666 0.4414 MASNAACVNNLVAGEVVVAAKMSEEDGNNNVDYSQRGQWLRAAVLGANDGLVSVASLMMGVGAVKRDSKAMLLAGLVGCIAGACSMALGEYVSVSTQYEVEVAQIKRDMMMMMENKNEMEKKRRSLLPNPLHAALASALSFTVGAVIPLVFTAFVRDYRLRLGLCVVVSSLFLVGFGCLGAELGHTHNVKSSIRILIGGLLAMAITFGLTKLVGFSANLEL* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4178 221 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 22 214 IPR008217 GO:0005384|GO:0030026
Ahy13g4178 221 Pfam VIT family 109 210 IPR008217 GO:0005384|GO:0030026
Ahy13g4178 221 Pfam VIT family 40 119 IPR008217 GO:0005384|GO:0030026
Ahy13g4178 221 Coils Coil 102 122 - -
Ahy13g4178 221 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 2.1 22 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4178 Ahy-Chr13 141279362 141282248 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g4178 24 214 Nodulin-like Gene Family AT3G43660 59.162 6.56e-77 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4178 K22736 - pvy:116120399 234.572
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4178 13 141279362 141282248 Ahy13g4178 13 141279362 141282248 ECH
Ahy13g4178 13 141279362 141282248 Ahy3g3902 3 138372672 138373650 hybridization