Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4177 ATGATCTCTCTGTCTATAAATACTCTTCACTACAAGCGTGTGTTCTCCACAAGCTCTTCAAATTCCTTTCTCCCTCTCTACCTTACTATATTTAACAACTCTCTATTACCATTATTTCCCTTCTCCTTCATGGCTTCCACTAATGGAACTTCACCTAACCACATTGAAATTCCCATGCATGCAAATGGTGCTGCTCTTGTGGTGCAGCCAAAACCAAACCAAGTGGTTGACCAAGAGAGCAATACTAACTACACTCAAAGGGCTCAGTGGCTCCGAGCAGCAGTGCTCGGAGCCAATGACGGACTAGTCTCTGTTGCATCACTCATGATGGGTGTTGGAGCTGTTAAGCATGACATCACAGCCATGGTTCTAGCAGGCTTCGCCGGCCTAGTAGCCGGAGCATGCAGCATGGCAATCGGAGAGTTTGTCTCTGTGTACACTCAGTATGACATAGAGAAGGCTCAGATAAAGAGAGAAAGAGAACCAAATGAAGAAGAAGAAGTAGCGGATCATGAGAGGGAAAAGCTGCCAAATCCATTTCAAGCAGCAGCAGCATCAGCAGTGGCATTTTCTGTGGGTGGTGTGGTGCCAATGCTAGCAGCTTTGTTCATAAGGAACCATAAGGTTAGAATGGGTGTTGTTGCTGTTGCTGTTAGCTTAGCATTGTTGGTGTTTGGAATTTTTGGAGCCATTCTTGGTAGAACTCCTGTCACAAGATCCTGTCTCAGGGTTCTCATTGGAGGTTGGATGGCTATGGCTATCACTTTTGGCTTCACCAAGTTGCTTGGCTCTGTTTCACTTTAG 804 0.4577 MISLSINTLHYKRVFSTSSSNSFLPLYLTIFNNSLLPLFPFSFMASTNGTSPNHIEIPMHANGAALVVQPKPNQVVDQESNTNYTQRAQWLRAAVLGANDGLVSVASLMMGVGAVKHDITAMVLAGFAGLVAGACSMAIGEFVSVYTQYDIEKAQIKREREPNEEEEVADHEREKLPNPFQAAAASAVAFSVGGVVPMLAALFIRNHKVRMGVVAVAVSLALLVFGIFGAILGRTPVTRSCLRVLIGGWMAMAITFGFTKLLGSVSL* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4177 267 Pfam VIT family 171 259 IPR008217 GO:0005384|GO:0030026
Ahy13g4177 267 Pfam VIT family 91 172 IPR008217 GO:0005384|GO:0030026
Ahy13g4177 267 PANTHER VACUOLAR IRON TRANSPORTER-LIKE PROTEIN 47 264 - -
Ahy13g4177 267 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 47 264 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4177 Ahy-Chr13 141276374 141277799 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g4177 77 264 Nodulin-like Gene Family AT3G43660 65.957 1.00e-89 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4177 K22736 - gmx:100802489 294.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4177 13 141276374 141277799 Ahy13g4177 13 141276374 141277799 ECH
Ahy13g4177 13 141276374 141277799 Ahy3g3901 3 138371446 138372612 hybridization