Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4171 ATGGATGACTTGTCCAAGAGCCAGATGTTTGTGATTCATGGTGTTGCTGCAGTTGGCTCTGTGGCTTTTGCTTCTGCTCTCACATATCCCCTCGACACCATGAAAGTCCTGACTCAGGTTGCTTCTAGTTCCGGTAAACAATTGAATGCTGCCGAGCTCTTGCTTAGAATTCTCACTCTCTCTGGTAATTCAGGTCTGTTTAGTGGTTATGGATCGTTAGCACTTGGAAGGACTCTTGGTCTCGGAGCTCGATTTGGGGTCTATGAAATCATCACTGCCTTTTATAAGGATGGGCTGGAAGATAATTATGTCTCTGCTTCTGATGCTCTTTTGGCTGGAATGGCAGCTGGTGCTGTAGAGGCTTTGATAAGCTCTCCATTTGAACTTATCAAGCTTCGTGAACAGGTTTCCTCAGCTTCATACATTCCGAACTCTACTTTTGCTTTGGACAAGGGAGCCCAACCACCTTTAATTTCAAGATTACTGAGTGGCTGTTATCCTGACAAGAGATCCTTGAACCAATATGTCGGTCTCATCTCTACCCTATCTACCAAAAATACTAATGTGACAAGTGCACTGCTGGAGTATCCTTGGATGATGACAGGATCTGGGAAGCCACCATCAGTTTGCAATGTCAGAAGGCCATCTGATATTATATCATTGGAAGGATGGGGCGCATTATGGAGAGGTCTTCGTTCGGGAATTGCTCGAGATTCTGTGTTTGGTGGTGTATTTTTCTCAAGCTGGCAGTTTCTGCATCAAGCAATGCTTGATTGGAAGGCTGTAGGGATGGATCCTCCGCCCAGGTCAGATGAAGAAGTTGGTCCATTGTCTCCTTTATTTGTTAGTATTGCTGCTGGATTGTCAGCTTCAGTTGCTGCTGCGGCTTCTCATGCCTTTGATACTACAAGAACTAGATCACAGTGCACTGTGCTACCAAAGTATGTTTCAATGGAGAGAAGGCTCCTGAAGTGGAAACAGCCAGGAAACAAGTTTGAAAGATATACCGGGATCCATCCTTCTGACAGGAATCTATTGTTCCGTGGTCTTCGGTGGCGGATGGCTCGCTCTGGGCTTGCATCATTCATGATTGTAGGAAGTTATTTCTTCGCTGTCGATCATCTTGCTTCTAATTTGACTTGA 1143 0.4523 MDDLSKSQMFVIHGVAAVGSVAFASALTYPLDTMKVLTQVASSSGKQLNAAELLLRILTLSGNSGLFSGYGSLALGRTLGLGARFGVYEIITAFYKDGLEDNYVSASDALLAGMAAGAVEALISSPFELIKLREQVSSASYIPNSTFALDKGAQPPLISRLLSGCYPDKRSLNQYVGLISTLSTKNTNVTSALLEYPWMMTGSGKPPSVCNVRRPSDIISLEGWGALWRGLRSGIARDSVFGGVFFSSWQFLHQAMLDWKAVGMDPPPRSDEEVGPLSPLFVSIAAGLSASVAAAASHAFDTTRTRSQCTVLPKYVSMERRLLKWKQPGNKFERYTGIHPSDRNLLFRGLRWRMARSGLASFMIVGSYFFAVDHLASNLT* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4171 380 ProSiteProfiles Solute carrier (Solcar) repeat profile. 8 94 IPR018108 -
Ahy13g4171 380 PANTHER CARRIER PROTEIN 2 376 - -
Ahy13g4171 380 Gene3D Mitochondrial carrier domain 11 379 IPR023395 -
Ahy13g4171 380 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 2 376 - -
Ahy13g4171 380 SUPERFAMILY Mitochondrial carrier 10 365 IPR023395 -
Ahy13g4171 380 Pfam Mitochondrial carrier protein 10 96 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4171 Ahy-Chr13 141211234 141216032 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g4171 29 258 Antiporters AT1G79900 24.621 1.90e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4171 - - ahf:112734472 711.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4171 13 141211234 141216032 Ahy3g3895 3 138320806 138324990 hybridization