Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4163 ATGGAGCGAGTGGTTTCATGTTTAATGGGATTGGGACCGTTTCTTCTTTATGCAGCTTTGGTATTTGATGTTATGCTTGAGGTTTCTGGCAATCAAGAAGGTGATGCCCTGAATGCATTCAAGACTCAGAGAGGCTTGAAAGATCCTAATAATGCTCTTCAAACCTGGGATGCCACTCTTGTAAATCCTTGCACATGGTTTCATGTCACTTGCAACCAAGATAATAGTGTGACCAGCATGGAACTTTTCAATAATGACTTAACTGGGCCTATCCCAAATGAGCTTGGAAATTTGATAAATTTGGAGAAGTTGGATCTTTACTCAAACAACTTAACTGGTGTCATACCAGACACATTGGGCAACCTTAAAAATTTACACGACCTGCGTCTCAACAACAACAGTTTGTCAGGAAAAATTCCCATATCTTTGACCAATATTTTGACTCTGCAAGTCCTTGATTTATCATACAACCAGTTAACAGGAAATATTCCAGTCAATGGTTCATTTTCATCATTTACCCCCGTCAGTTTCGAACATAACCACTTGAATGAAACAACAAATCCATCTCCACGCTATGTTCCACCACAAAATACCACGTCAGTTAAGAGTGCCATCGGAGCTATTGCTGGAGGAGTTGCTGCTGGAGCTGCTTTATCAATTGCAGCCCCTGTGATTGTAGTTGCTTACTGGCTACGAAGGAAACCACAGGATGAGTACTTTGATGTTCCTGCTGAGGAGGATCCTGAAGTTCACCTTGGTCCACTTAAGAAGTTTTCTCTTCGTGAGCTGCAAATTGCTACAGATCACTTCAATGCCAAAAATGTGTTGGGAAAGGGTGCGTTTGGTAAGGTTTACGAAGGACGCTTAGCCGATGGCAAGCCAGTAGCAGTGAAAAGACTTAAAGAGGAACGCGCCTACAGTGAGGACTTTCAGTTTCAAACGGAAGTGGAAATGATTGGCGTGGCTAAGCATCGCAATTTGCTTCAGCTGCTTGGTTTTTGTATGACTCCTACTGAACGCATGCTTGTGTATCCTTTGATGGTTAATGGAAGTCTAGCATCTTGCTTAAGAGGGCGTGCGCCATCAAAACCGCCGCTTGGTTGGGCACAACGGGAGTCTATTGCGCTGGGATCTGCTAAGGGGCTTGCTTATTTGCATGAGCATTGTAACCCGAAGATTATTCATCGGGATGTTAAAGCTGATAATATATTGCTAGACGAACACTTTGAAGCAGTTGTTGGAGATTTCGGTTTAGCAAAGCTTATGGATTTTAAAGATACTCATGTTACCACAGCTGTAAAAGGTACAATTGGACATATAGCACCCGAATACCTTGGAACTGGAAAGTCTTCGGAGAAGACTGATGTTTATGGATATGGTGTGATGCTTCTTGAACTAATAACTGGACAGAGGTCTTTCGACATGGCAAGGATTGCCAGAGATGAAGAAATCTTATTGCTTGCTTGGGTAAAAGGGCATCTGAATGACAACAAGTTGGACAAACTGGTGGATAGTGATTTACAGGGAGACTATAACTTAGAAAAGGTGGAGCAATTAATCCAAGTGGCCATATTATGCACACAAGACTCTCCTATGGATAGGCCTAACATGTCTGAGGTAGTGAGAATGCTGGAAGGTGCTGGTTTGGCTGAAAGATGGGAAGAATGGAAGAAAAAGGACAAGATCCGGCAAGAATTCGACCGCACCCACCGTTATGTTGCCAATTTGAGGAACCGTGATGAGTCAACCTCAAATGCCAACATGGAACCAGAACAACTCTCAGGTCCTAGATGA 1794 0.4298 MERVVSCLMGLGPFLLYAALVFDVMLEVSGNQEGDALNAFKTQRGLKDPNNALQTWDATLVNPCTWFHVTCNQDNSVTSMELFNNDLTGPIPNELGNLINLEKLDLYSNNLTGVIPDTLGNLKNLHDLRLNNNSLSGKIPISLTNILTLQVLDLSYNQLTGNIPVNGSFSSFTPVSFEHNHLNETTNPSPRYVPPQNTTSVKSAIGAIAGGVAAGAALSIAAPVIVVAYWLRRKPQDEYFDVPAEEDPEVHLGPLKKFSLRELQIATDHFNAKNVLGKGAFGKVYEGRLADGKPVAVKRLKEERAYSEDFQFQTEVEMIGVAKHRNLLQLLGFCMTPTERMLVYPLMVNGSLASCLRGRAPSKPPLGWAQRESIALGSAKGLAYLHEHCNPKIIHRDVKADNILLDEHFEAVVGDFGLAKLMDFKDTHVTTAVKGTIGHIAPEYLGTGKSSEKTDVYGYGVMLLELITGQRSFDMARIARDEEILLLAWVKGHLNDNKLDKLVDSDLQGDYNLEKVEQLIQVAILCTQDSPMDRPNMSEVVRMLEGAGLAERWEEWKKKDKIRQEFDRTHRYVANLRNRDESTSNANMEPEQLSGPR* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4163 597 ProSiteProfiles Protein kinase domain profile. 270 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g4163 597 SUPERFAMILY Protein kinase-like (PK-like) 249 545 IPR011009 -
Ahy13g4163 597 SUPERFAMILY L domain-like 55 185 - -
Ahy13g4163 597 Gene3D Transferase(Phosphotransferase) domain 1 347 564 - -
Ahy13g4163 597 SMART serkin_6 270 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g4163 597 ProSitePatterns Serine/Threonine protein kinases active-site signature. 393 405 IPR008271 GO:0004672|GO:0006468
Ahy13g4163 597 Gene3D Ribonuclease Inhibitor 29 193 IPR032675 -
Ahy13g4163 597 PANTHER BNAA08G11770D PROTEIN 13 125 IPR031048 GO:0004675|GO:0005102|GO:0006468
Ahy13g4163 597 PANTHER BNAA08G11770D PROTEIN 80 597 IPR031048 GO:0004675|GO:0005102|GO:0006468
Ahy13g4163 597 Pfam Leucine rich repeat N-terminal domain 31 72 IPR013210 -
Ahy13g4163 597 Pfam Leucine rich repeat 100 159 IPR001611 GO:0005515
Ahy13g4163 597 Gene3D Phosphorylase Kinase; domain 1 239 345 - -
Ahy13g4163 597 ProSitePatterns Protein kinases ATP-binding region signature. 276 298 IPR017441 GO:0005524
Ahy13g4163 597 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 13 125 - -
Ahy13g4163 597 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 80 597 - -
Ahy13g4163 597 Pfam Protein tyrosine and serine/threonine kinase 272 544 IPR001245 GO:0004672|GO:0006468
Ahy13g4163 597 MobiDBLite consensus disorder prediction 577 597 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4163 Ahy-Chr13 141118183 141123154 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g4163 13 597 Receptor kinase-like Gene Family AT4G33430 60.698 0.0 733
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Ahy13g4163 PK_Tyr_Ser-Thr 2.50E-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4163 K13416 - gmx:100800522 784.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4163 13 141118183 141123154 Ahy13g4163 13 141118183 141123154 ECH
Ahy13g4163 13 141118183 141123154 Ahy3g3885 3 138208778 138213658 hybridization