Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4159 ATGGATGCTTTTTTGTTGAGCTCCAATTCAAAGCCATTTCAGTGCCTTCCATGGCTCTCATCAACCAAGCATCAAAGGCACTATTCTCATATCCATCTTTCATGCAGAGCCACAAAGGTGGAGTGTGAGAGCAACTTCTACAAGGTTCTCAGTGTTAGTCCAAAGAGTGCAACCATGGATGAGATCAAGAGAGCTTATAGATCCATGGCGCTTCAGTACCATCCAGATGTGTGCCATGATCCTTCCATGAAGGAGGAGTCTAATAGGATGTTTGTGCAGTTGAATGCTGCTTATGAGACCTTGTCCAACCCCATGCTTAGACAACAGTATGATAGTCAATTAGGTTTGAGTGTCAGCCATGATTATTCTGAAACAAGTTTGAGGAGCCTTTGGGAGGAGGAGCAACACCAAGTGGTTGTTGAATTGAAGACAAGGTCTCGGAGACGCATGGAGCAAAAGGCCAACAGAATGAGGGCACCAACCAGAAGAAAAGACAGGAACTGA 504 0.4504 MDAFLLSSNSKPFQCLPWLSSTKHQRHYSHIHLSCRATKVECESNFYKVLSVSPKSATMDEIKRAYRSMALQYHPDVCHDPSMKEESNRMFVQLNAAYETLSNPMLRQQYDSQLGLSVSHDYSETSLRSLWEEEQHQVVVELKTRSRRRMEQKANRMRAPTRRKDRN* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4159 167 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 7 165 - -
Ahy13g4159 167 Pfam DnaJ domain 45 111 IPR001623 -
Ahy13g4159 167 ProSitePatterns Nt-dnaJ domain signature. 91 110 IPR018253 -
Ahy13g4159 167 CDD DnaJ 45 103 IPR001623 -
Ahy13g4159 167 SMART dnaj_3 44 106 IPR001623 -
Ahy13g4159 167 PRINTS DnaJ domain signature 66 81 IPR001623 -
Ahy13g4159 167 PRINTS DnaJ domain signature 86 106 IPR001623 -
Ahy13g4159 167 PRINTS DnaJ domain signature 48 66 IPR001623 -
Ahy13g4159 167 ProSiteProfiles dnaJ domain profile. 45 114 IPR001623 -
Ahy13g4159 167 SUPERFAMILY Chaperone J-domain 32 110 IPR036869 -
Ahy13g4159 167 MobiDBLite consensus disorder prediction 145 167 - -
Ahy13g4159 167 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 7 165 - -
Ahy13g4159 167 Gene3D DnaJ domain 28 153 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4159 Ahy-Chr13 141091335 141092039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g4159 47 112 C2H2 Transcription Factor Family AT1G74250 44.118 1.11e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4159 - - gmx:100811478 182.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4159 13 141091335 141092039 Ahy3g3881 3 138190011 138190681 hybridization