Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4150 ATGAATTTGTTTGCACAAACAACGGCTACTGTTATCCTACCTCTTCTTCTCCTTGTCTCCCTTTTCTGTTATATCAATGTTTCTTTGGCGCAGAATTGTAAGAGTCAAATTTCACGTACTATTATAGTTGATCAATCTGGAAAGTCAAAATTTAAAACCGTTCAATCTGCAATTGATTCAATACCTGAAAATAACAACCAATGGGTGAAAATTCACATCAATGCTGGAACCTACAAAGAGAAGGTTCATATTCCATGTCAGAAGCCATGCATTTTTTTGGAAGGGGAAGGCATAGACGTTACTACTATTACATACAATGATCACCAATCAACTGATGAAAGTGCCACATTCTCTTCTTCTCCAGACAATGTCGTTGCAAGCAAGATTACATTTAAGAACTCGTTCGATGTGGGGAAAATGTTGAGTTTGCAAGAAATAAAAGATGGAAATGATGTTGTGCCAGCATTGTCAGCAAGAATATATGGAGACAAATCTGGGTTTTATGATTGTAGGTTTGTGGGATATCAAGATACATTATGGGATGTGGAAGGTCGTCATTATTACAAAAATTGTATTATCGAAGGTGCTGTAGATTTTATATTTGGTAGTGGTCAGTCTTATTTCGAGGATTGTGTGATAAATGCAACATCCCCAGGGTTCATAACAGCCCAAGGGCGTGAATCAGATAATGACCCAAGTGGTTTTGTGTTCAAAGGGGGTTCTGTGGTTGGCTCCAACCCTGCTTCATCTTTCTTGGGACGAGCCTATGGTCCCTATTCTCGAGTTATCTTTTATGGAACTAATTTGGGTTCTGTGGTTCATCCTAAAGGTTGGCATTCCTGGCATTTTGCAACTCACGAGATAGTTGTTCATAAAACTTATAAGGGTGGTAGTGGTGGTAAGGTGTATATAGATTTAGGTTCCATGGAGGTATTTGATGGTGGTGGGATGGGACTTGAGAGTATTGCAGTTGAGGACAATATTGATAAAAGTCATATGAATATGATGGTTGAGGTTTATAATCATAGCAAGAACTACTATAGTCATTGA 1050 0.3829 MNLFAQTTATVILPLLLLVSLFCYINVSLAQNCKSQISRTIIVDQSGKSKFKTVQSAIDSIPENNNQWVKIHINAGTYKEKVHIPCQKPCIFLEGEGIDVTTITYNDHQSTDESATFSSSPDNVVASKITFKNSFDVGKMLSLQEIKDGNDVVPALSARIYGDKSGFYDCRFVGYQDTLWDVEGRHYYKNCIIEGAVDFIFGSGQSYFEDCVINATSPGFITAQGRESDNDPSGFVFKGGSVVGSNPASSFLGRAYGPYSRVIFYGTNLGSVVHPKGWHSWHFATHEIVVHKTYKGGSGGKVYIDLGSMEVFDGGGMGLESIAVEDNIDKSHMNMMVEVYNHSKNYYSH* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4150 349 Pfam Pectinesterase 41 283 IPR000070 GO:0030599|GO:0042545
Ahy13g4150 349 ProSitePatterns Pectinesterase signature 2. 193 202 IPR033131 -
Ahy13g4150 349 SUPERFAMILY Pectin lyase-like 36 282 IPR011050 -
Ahy13g4150 349 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 16 287 - -
Ahy13g4150 349 PANTHER PECTINESTERASE 16 287 - -
Ahy13g4150 349 Gene3D - 33 302 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4150 Ahy-Chr13 140999990 141005961 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g4150 23 287 Carbohydrate Esterase AT2G19150 45.520 4.14e-73 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4150 - - ahf:112735617 696.427