Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4133 ATGGCGGAGCGTTCTTCCTCTTTTGGACTTGGTCCTCGATTAGATCTTCAGCAACTGCAGTTTGAAGCACAGCATCGGTGGTTGCGCCCTGCAGAAATATGTGAAATTCTTTGTAACTATCGTATCTTTCATATCACATCAGAACCACCAAACAGGCCACCAAGTGGTTCGCTTTTTCTTTTTGATAGGAAGGTTTTGAGATACTTCAGAAAGGATGGACATAATTGGAGAAAGAAAAAGGACGGAAAGACTGTGAAGGAAGCTCATGAGAAGTTGAAAGTGGGAAGTGTTGATGTGTTACACTGCTACTATGCCCATGGAGAAGAAAATGAAAATTTTCAGAGGCGTAGCTATTGGATGCTTGAACCGGATATGATGCATATAGTATTTGTCCACTATTTGGATGTTAAGGTTAACAAGACCAATATCGGTAGAAATATTGATACAGATGAGGCTATGTCAGAATCCCAGAAGGGCAGTTCTGTGTTATCTGGCTTCCCCACAAGTTATAACAGCATGCCTTCTCGAAGTACAGATTCCATGAGTCCGACTAGCACTTTGACGTCATTATGTGAAGATGCTGATTCTGAGGATATTCGTCAAGCAAGTTCTGGAATGCACTCGTTTGGCAACCCTTTGGGGAGTGGTCAGGCAATGGATATCATTGATACTTGTTCAAATAGATCATATTTTATGCATCCCATTTCAGGTGATCATGGACAATCAACAATTTCTGTAACAGACTACATTCCACATGTCCAAGGGGATAAATCTAGATTAGGTATTACTGCTTACATTGAGGACCGAAAATCACATGTCATGCCATTAAGGGACACTATCACAGAGCAATCTGTTGGATTGTATACACCTTGTTCTTCCATTTCATCTGGTTCAAGGGGAAGCACCCTTGAACAAGAAAAAGCTGTTCCTGAGAATCTCTTCGGATCTAAAAGTGGCCTCAATGAGGAGTCAAGGGGTTCTCAGTCTACCCAGTCAAATTGGCAGATTACTTTTGATGAGAATACTGGACCTTTGCCAAGATGGAGCCTAACCGAATCGTTAAGTTTGGAATTTGAATCTGATTATAGCATGGCTTTATTTGGGGGTGAAACTGATAATGCAATTCCAGAGATTTGCCCTGACTTGTTCACTTCTAATGGAGAGCTAAAAGAGCAACCTGTGCAACAGAAGTTCCCAAAGCAGTCTACAGATGCACAATCTCAGCATGCACCAAGATCCGACAGTGAATATGAACTTCCTCGGGAGGATAGTGCTGGCTATTCCTTGAATGCAAAGCATGCATTACTGGATGGAGAGGAGAACCTGAAGAAGGTTGATAGCTTCTCAAGGTGGATTACTAAAGAACTTGGAGAGGTGGATGATCTGCATCTGCAGTCTTCCCCTGGTATTTCATGGAGCACAGATGAGTGTGGGCATGTAATAGATGATACATCATTGAACCCGTCCTTATCCCAAGATCAGTTGTTCAGCATAAGTGATTTTTCACCTAAATGGGCTTATGCAGATTCCGAGATTGAGGTGTTGATTATTGGAGCATTTTTGAAGAGTCAACTGGAGGTGGAAGCCTGTCACTGGTCCTGTATGTTTGGTGAAGTGGAGGTTCCTGCTGAGATTTTAGCCAATGGAATTATGTGCTGTCAAGCTCCACCTCGTCAGGTTGGACGTGTACCTTTCTATGTGACCTGTTCCAATAGGTTTGCTTGTAGTGAAGTGAGGGACTTTGAGTTCAGAGAGGGATTTGCTAGGAATGTAGATTTTGCAGATTTTTTCTACAGTTCAACTGAAATGATGCTTCATTTGCGACTTGATGAGTTACTTTCTTCGAAATCAGTGCTATCTACTAATCAAGATTTTGAGGGTTATATGGAGACAAGAAACTTAATTTTTAAGCTCATCTCACTTAAAGAGGAAGAGGAATATTCACATAAGGAAGAGGCAACTGCAGGGTTGAGTGTATCACAACACAAATTGGAGGAGCATGTGTTTCACAGGAAGATTAAAGAGAAGCTCTACTCATGGCTTCTTCACAAGGTAACTGAAGGTGGTAAAGGGCCAAATGTATTAGACAAGGATGGTCAGGGTGTGTTACATTTAGTTGCTGCTCTTGGTTATGATTGGGCCATAACTCCAGTTATAACTGCTGGGGTTAATATCAACTTCCGTGATGTGAATGGATGGACAGCTTTACATTGGGCTGCATCCTGTGGCAGAGAGCGAACAGTTGCTGTCCTTGTCTCCATGGGTGCAGCAGCTGGAGCATTGACAGATCCAAGTCCAGCATTTCCTTCTGGTAGAACAGCTGCTGATCTTGCTTCTAGCAATGGACATAAAGGAATCTCTGGTTTTCTTGGAGAGTCATTATTAACTAGCCACCTTGCGTCACTTACAATGGATGATCCAAGTGAAGATGGCAGGAATAAAACTTTAGGTGGGAAAGCAGTGCAGACAGCTTCGGAGCGAAGTGCAACACCTCTACTTTATGGTGATGTATCAGATACTCTCTGCCTTAAGGATTCTCTTTCTGCTGTCCGTAATGCTACACAAGCCGCTGATCGCATACATCAAGTATTTAGGATGCAGTCATTTCAGAGGAAGCAGTTAGCTCAGTGTGAAGACGATGATGAGTTTGGATTGTCAGATCAACAAGTTCTTTCCTTTATAGCTTCTAGGGCTTGCAAATCTGGACAAGGAGAGGGTTTAGTGAATGCTGCTGCAACACAAATTCAGAAAAAATTTCGTGGTTGGAAGAAGAGAAAAGAATTCCTGATCATTCGCCAAAGAGTTGTCAAAATCCAGGCCCACGTAAGAGGTCACCAGGTAAGGAAGCAATACAAATTAATCTGGTCTGTTGGAATCCTAGAGAAGGTCATATTACGCTGGAGACGTAAGGGCAGAGGCTTACGTGGATTCCGACCAGATACCCTTAACATGGTCCCCAACCCACCAAGCAATCCTTCACAAGAGGATGACTATGATGTTCTCAAAGAAGGAAGGAAGCAAAGTGAAGAAAGGTTCCAAAAGGCCCTTTCAAGGGTGAAATCCATGGTCCAGTACCCGGAGGCACGTGCTCAATACCGGCGGGTGCTGAATGTAGTAGAGGACTTTCGTCAAACCAAGGAATATACCAATTCGGAAGACACTGTTGATGGGGTGGCGGATTTGATTGATATTGATATGCTTTTGGACGATGAGAACTTCTTGCCTATAGCATATGATTGA 3240 0.429 MAERSSSFGLGPRLDLQQLQFEAQHRWLRPAEICEILCNYRIFHITSEPPNRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEENENFQRRSYWMLEPDMMHIVFVHYLDVKVNKTNIGRNIDTDEAMSESQKGSSVLSGFPTSYNSMPSRSTDSMSPTSTLTSLCEDADSEDIRQASSGMHSFGNPLGSGQAMDIIDTCSNRSYFMHPISGDHGQSTISVTDYIPHVQGDKSRLGITAYIEDRKSHVMPLRDTITEQSVGLYTPCSSISSGSRGSTLEQEKAVPENLFGSKSGLNEESRGSQSTQSNWQITFDENTGPLPRWSLTESLSLEFESDYSMALFGGETDNAIPEICPDLFTSNGELKEQPVQQKFPKQSTDAQSQHAPRSDSEYELPREDSAGYSLNAKHALLDGEENLKKVDSFSRWITKELGEVDDLHLQSSPGISWSTDECGHVIDDTSLNPSLSQDQLFSISDFSPKWAYADSEIEVLIIGAFLKSQLEVEACHWSCMFGEVEVPAEILANGIMCCQAPPRQVGRVPFYVTCSNRFACSEVRDFEFREGFARNVDFADFFYSSTEMMLHLRLDELLSSKSVLSTNQDFEGYMETRNLIFKLISLKEEEEYSHKEEATAGLSVSQHKLEEHVFHRKIKEKLYSWLLHKVTEGGKGPNVLDKDGQGVLHLVAALGYDWAITPVITAGVNINFRDVNGWTALHWAASCGRERTVAVLVSMGAAAGALTDPSPAFPSGRTAADLASSNGHKGISGFLGESLLTSHLASLTMDDPSEDGRNKTLGGKAVQTASERSATPLLYGDVSDTLCLKDSLSAVRNATQAADRIHQVFRMQSFQRKQLAQCEDDDEFGLSDQQVLSFIASRACKSGQGEGLVNAAATQIQKKFRGWKKRKEFLIIRQRVVKIQAHVRGHQVRKQYKLIWSVGILEKVILRWRRKGRGLRGFRPDTLNMVPNPPSNPSQEDDYDVLKEGRKQSEERFQKALSRVKSMVQYPEARAQYRRVLNVVEDFRQTKEYTNSEDTVDGVADLIDIDMLLDDENFLPIAYD* 1080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4133 1079 Gene3D - 667 797 IPR036770 -
Ahy13g4133 1079 Pfam IQ calmodulin-binding motif 910 928 IPR000048 GO:0005515
Ahy13g4133 1079 Pfam IQ calmodulin-binding motif 933 952 IPR000048 GO:0005515
Ahy13g4133 1079 SUPERFAMILY E set domains 498 584 IPR014756 -
Ahy13g4133 1079 MobiDBLite consensus disorder prediction 293 341 - -
Ahy13g4133 1079 ProSiteProfiles Ankyrin repeat profile. 731 763 IPR002110 GO:0005515
Ahy13g4133 1079 Pfam Ankyrin repeats (3 copies) 703 786 IPR002110 GO:0005515
Ahy13g4133 1079 ProSiteProfiles Ankyrin repeat region circular profile. 731 756 - -
Ahy13g4133 1079 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 1 6 1079 - -
Ahy13g4133 1079 SMART iq_5 930 952 IPR000048 GO:0005515
Ahy13g4133 1079 SMART iq_5 907 929 IPR000048 GO:0005515
Ahy13g4133 1079 ProSiteProfiles IQ motif profile. 909 937 IPR000048 GO:0005515
Ahy13g4133 1079 MobiDBLite consensus disorder prediction 392 420 - -
Ahy13g4133 1079 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 6 1079 - -
Ahy13g4133 1079 SMART CG_1_2 19 137 IPR005559 GO:0003677
Ahy13g4133 1079 MobiDBLite consensus disorder prediction 317 341 - -
Ahy13g4133 1079 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 907 954 IPR027417 -
Ahy13g4133 1079 MobiDBLite consensus disorder prediction 978 997 - -
Ahy13g4133 1079 Pfam IPT/TIG domain 497 576 IPR002909 -
Ahy13g4133 1079 ProSiteProfiles CG-1 DNA-binding domain profile. 16 142 IPR005559 GO:0003677
Ahy13g4133 1079 ProSiteProfiles IQ motif profile. 931 956 IPR000048 GO:0005515
Ahy13g4133 1079 Pfam CG-1 domain 22 135 IPR005559 GO:0003677
Ahy13g4133 1079 MobiDBLite consensus disorder prediction 392 413 - -
Ahy13g4133 1079 Gene3D - 908 955 - -
Ahy13g4133 1079 SUPERFAMILY Ankyrin repeat 687 790 IPR036770 -
Ahy13g4133 1079 MobiDBLite consensus disorder prediction 151 188 - -
Ahy13g4133 1079 Gene3D Immunoglobulins 491 586 IPR013783 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4133 Ahy-Chr13 140859304 140866998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g4133 1 1051 CAMTA Transcription Factor Family AT5G64220 53.541 0.0 1051
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Ahy13g4133 CG-1 1.40E-50 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4133 K21596 - gmx:100795682 1588.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4133 13 140859304 140866998 Ahy3g3857 3 137985645 137993325 hybridization
Ahy13g4133 13 140859304 140866998 Ahy20g0806 20 10275571 10284142 PCT
Ahy13g4133 13 140859304 140866998 Ahy10g0534 10 5272572 5280870 PCT
Ahy20g0806 20 10275571 10284142 Ahy13g4133 13 140859304 140866998 PCT
Ahy10g0534 10 5272572 5280870 Ahy13g4133 13 140859304 140866998 PCT