Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4131 ATGGATAGTCTCTGTTGCTTCAGCTCTGTTAGAGGGGTGGTTGGAGGGCATTCTTCAAGTAACTCTGGAAAGGGCAAGAGCCATCAGTCTACAACCAAGTATGGCTATAGCCTTGTTAAAGGGAAAGCAAACCACCCGATGGAGGACTATCATGTAGCGAAATTTGTCCAGTTCAAGGGGCAAGAGCTGGGACTTTTTGCTATATATGATGGACACTTGGGAGATAGCGTACCAGCATATTTACAAAAGCATCTTTTTTCAAATATCTTGGATGAAAAGGACTTTTGGGAAGATCCGTTCATGTCTATTTCTAAAGCTTATGAGACAACAGATCAAGCAATTCTTTCTCACAGTCCTGATTTGGGACGAGGAGGGTCAACTGCTGTGACTGCAATTCTTATAAATAGTCAGAAATTATGGGTAGCCAACGTTGGAGATTCACGAGCAGTTCTGTCAAGGGGAGGGGTGGCTGTACAGATGACTACTGACCATGAACCTAATACTGAGCGGGGCAGCATTGAGAACAGAGGTGGCTTTGTCTCAAACATGCCAGGAGATGTTGCAAGGGTGAATGGGCAGCTTGCAGTTTCGCGAGCATTTGGAGACAGAAACCTCAAAACACATCTGCGATCGGATCCTGACATCCAGTATGCCGATATTAACCCAAATATTGAGCTTTTGATACTTGCTAGTGATGGTCTATGGAAGGTAATGGGAAACCAAGAGGCTGTAGATATTGCAAAAAGGATAAAGGATCCACAAAGGGCAGCCAAACAACTAGCCACTGAGGCATTGAACAAAGACAGTAAAGATGACATTTCATGCATTGTAGTTCGTTTCAAGGGATGA 849 0.4405 MDSLCCFSSVRGVVGGHSSSNSGKGKSHQSTTKYGYSLVKGKANHPMEDYHVAKFVQFKGQELGLFAIYDGHLGDSVPAYLQKHLFSNILDEKDFWEDPFMSISKAYETTDQAILSHSPDLGRGGSTAVTAILINSQKLWVANVGDSRAVLSRGGVAVQMTTDHEPNTERGSIENRGGFVSNMPGDVARVNGQLAVSRAFGDRNLKTHLRSDPDIQYADINPNIELLILASDGLWKVMGNQEAVDIAKRIKDPQRAAKQLATEALNKDSKDDISCIVVRFKG* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4131 282 PANTHER PROTEIN PHOSPHATASE 2C 1 281 IPR015655 GO:0004722|GO:0006470
Ahy13g4131 282 SMART PP2C_SIG_2 44 280 IPR001932 -
Ahy13g4131 282 ProSiteProfiles PPM-type phosphatase domain profile. 33 280 IPR001932 -
Ahy13g4131 282 Pfam Protein phosphatase 2C 42 273 IPR001932 -
Ahy13g4131 282 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 1 281 - -
Ahy13g4131 282 SUPERFAMILY PP2C-like 29 281 IPR036457 -
Ahy13g4131 282 CDD PP2Cc 33 280 IPR001932 -
Ahy13g4131 282 SMART PP2C_4 29 278 IPR001932 -
Ahy13g4131 282 Gene3D - 15 282 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4131 Ahy-Chr13 140841632 140846088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g4131 1 281 PP2C-type Phosphatase Gene Family AT1G22280 70.383 1.06e-146 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4131 K17506 - gmx:100801722 503.056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4131 13 140841632 140846088 Ahy3g3855 3 137973950 137978454 hybridization
Ahy13g4131 13 140841632 140846088 Ahy20g0805 20 10256081 10259822 PCT
Ahy13g4131 13 140841632 140846088 Ahy10g0533 10 5266193 5269984 PCT
Ahy20g0805 20 10256081 10259822 Ahy13g4131 13 140841632 140846088 PCT
Ahy10g0533 10 5266193 5269984 Ahy13g4131 13 140841632 140846088 PCT